EnhancerDB
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  3. vista24867[chr17:42173326-42173627]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24867[chr17:42173326-42173627]
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Tissue distribution of vista24867
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Transcription factor that possibly regulate vista24867[chr17:42173326-42173627]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 42172907 42173854 POLR2A UCSC Txn Factor no Conserved 108261860
chr17 42172907 42173854 POLR2A UCSC Txn Factor no Conserved 108261861
chr17 42173118 42173506 PHF8 UCSC Txn Factor no Conserved 108261931
chr17 42173118 42173506 PHF8 UCSC Txn Factor no Conserved 108261932
chr17 42173324 42173688 ELF1 UCSC Txn Factor no Conserved 108261957
chr17 42173323 42173334 FOSL2 JASPAR yes 21242451
chr17 42173323 42173334 FOSL2 JASPAR yes 54386437
chr17 42173323 42173337 PLAG1 JASPAR yes 21242452
chr17 42173323 42173337 PLAG1 JASPAR yes 54386438
chr17 42173349 42173353 H1TF2 TRANSFAC yes 21242453
chr17 42173349 42173353 NFE TRANSFAC yes 21242454
chr17 42173349 42173353 SRF TRANSFAC yes 21242455
chr17 42173349 42173353 H1TF2 TRANSFAC yes 54386439
chr17 42173349 42173353 NFE TRANSFAC yes 54386440
chr17 42173349 42173353 SRF TRANSFAC yes 54386441
chr17 42173362 42173368 MAZ TRANSFAC yes 21242456
chr17 42173362 42173368 MAZ TRANSFAC yes 54386442
chr17 42173383 42173389 LEF1 TRANSFAC yes 21242457
chr17 42173383 42173389 SOX10 JASPAR yes 21242458
chr17 42173383 42173389 LEF1 TRANSFAC yes 54386443
chr17 42173383 42173389 SOX10 JASPAR yes 54386444
chr17 42173403 42173421 TP53 JASPAR yes 21242459
chr17 42173403 42173421 TP53 JASPAR yes 54386445
chr17 42173405 42173420 TP53 JASPAR yes 21242460
chr17 42173405 42173420 TP53 JASPAR yes 54386446
chr17 42173407 42173411 ESR1 TRANSFAC yes 21242461
chr17 42173407 42173411 ESR1 TRANSFAC yes 54386447
chr17 42173436 42173448 ZBTB7A JASPAR yes 21242462
chr17 42173436 42173448 ZBTB7A JASPAR yes 54386448
chr17 42173437 42173456 RFX2 JASPAR yes 21242463
chr17 42173437 42173456 RFX2 JASPAR yes 54386449
chr17 42173439 42173454 RFX5 JASPAR yes 21242464
chr17 42173439 42173454 RFX5 JASPAR yes 54386450
chr17 42173441 42173457 RFX2 JASPAR yes 21242465
chr17 42173441 42173457 RFX3 JASPAR yes 21242466
chr17 42173441 42173457 RFX4 JASPAR yes 21242467
chr17 42173441 42173457 RFX5 JASPAR yes 21242468
chr17 42173441 42173457 RFX2 JASPAR yes 54386451
chr17 42173441 42173457 RFX3 JASPAR yes 54386452
chr17 42173441 42173457 RFX4 JASPAR yes 54386453
chr17 42173441 42173457 RFX5 JASPAR yes 54386454
chr17 42173442 42173461 RFX2 JASPAR yes 21242469
chr17 42173442 42173461 RFX2 JASPAR yes 54386455
chr17 42173455 42173466 FOXA1 JASPAR yes 21242470
chr17 42173455 42173466 FOXA1 JASPAR yes 54386456
chr17 42173455 42173470 FOXA1 JASPAR yes 21242471
chr17 42173455 42173470 FOXA1 JASPAR yes 54386457
chr17 42173457 42173461 LFA1 TRANSFAC yes 21242472
chr17 42173457 42173461 LFA1 TRANSFAC yes 54386458
chr17 42173461 42173481 RREB1 JASPAR yes 21242473
chr17 42173461 42173481 RREB1 JASPAR yes 54386459
chr17 42173462 42173477 RUNX2 JASPAR yes 21242474
chr17 42173462 42173477 RUNX2 JASPAR yes 54386460
chr17 42173468 42173487 CTCF JASPAR yes 21242475
chr17 42173468 42173487 CTCF JASPAR yes 54386461
chr17 42173470 42173484 ZIC1 JASPAR yes 21242476
chr17 42173470 42173484 ZIC1 JASPAR yes 54386462
chr17 42173478 42173497 REST JASPAR yes 21242477
chr17 42173478 42173497 REST JASPAR yes 54386463
chr17 42173480 42173491 TFAP2A JASPAR yes 21242478
chr17 42173480 42173491 TFAP2A JASPAR yes 54386464
chr17 42173504 42173510 SOX10 JASPAR yes 21242479
chr17 42173504 42173510 SOX10 JASPAR yes 54386465
chr17 42173517 42173524 ETS1 TRANSFAC yes 21242480
chr17 42173517 42173524 ETS1 TRANSFAC yes 54386466
chr17 42173517 42173528 FLI1 JASPAR yes 21242481
chr17 42173517 42173528 FLI1 JASPAR yes 54386467
chr17 42173518 42173526 EHF JASPAR yes 21242482
chr17 42173518 42173526 EHF JASPAR yes 54386468
chr17 42173525 42173530 ETS2 TRANSFAC yes 21242483
chr17 42173525 42173530 ETS2 TRANSFAC yes 54386469
chr17 42173534 42173539 GATA2 JASPAR yes 21242484
chr17 42173534 42173539 GATA2 JASPAR yes 54386470
chr17 42173547 42173568 ZNF263 JASPAR yes 21242485
chr17 42173547 42173568 ZNF263 JASPAR yes 54386471
chr17 42173548 42173553 ETS2 TRANSFAC yes 21242486
chr17 42173548 42173553 ETS2 TRANSFAC yes 54386472
chr17 42173549 42173563 SPI1 JASPAR yes 21242487
chr17 42173549 42173563 SPI1 JASPAR yes 54386473
chr17 42173550 42173563 ELF1 JASPAR yes 21242488
chr17 42173550 42173563 ELF1 JASPAR yes 54386474
chr17 42173550 42173571 ZNF263 JASPAR yes 21242489
chr17 42173550 42173571 ZNF263 JASPAR yes 54386475
chr17 42173551 42173563 EHF JASPAR yes 21242490
chr17 42173551 42173563 ELF1 JASPAR yes 21242491
chr17 42173551 42173563 ELF4 JASPAR yes 21242492
chr17 42173551 42173563 EHF JASPAR yes 54386476
chr17 42173551 42173563 ELF1 JASPAR yes 54386477
chr17 42173551 42173563 ELF4 JASPAR yes 54386478
chr17 42173551 42173564 ELF3 JASPAR yes 21242493
chr17 42173551 42173564 ELF3 JASPAR yes 54386479
chr17 42173551 42173572 IRF1 JASPAR yes 21242494
chr17 42173551 42173572 IRF1 JASPAR yes 54386480
chr17 42173552 42173557 SP1 TRANSFAC yes 21242495
chr17 42173552 42173557 SP1 TRANSFAC yes 54386481
chr17 42173552 42173563 ELF5 JASPAR yes 21242496
chr17 42173552 42173563 ELF5 JASPAR yes 54386482
chr17 42173553 42173563 ELK1 JASPAR yes 21242497
chr17 42173553 42173563 ELK3 JASPAR yes 21242498
chr17 42173553 42173563 ETV5 JASPAR yes 21242499
chr17 42173553 42173563 ETV6 JASPAR yes 21242500
chr17 42173553 42173563 GABPA JASPAR yes 21242501
chr17 42173553 42173563 ELK1 JASPAR yes 54386483
chr17 42173553 42173563 ELK3 JASPAR yes 54386484
chr17 42173553 42173563 ETV5 JASPAR yes 54386485
chr17 42173553 42173563 ETV6 JASPAR yes 54386486
chr17 42173553 42173563 GABPA JASPAR yes 54386487
chr17 42173553 42173564 ELK4 JASPAR yes 21242502
chr17 42173553 42173564 FLI1 JASPAR yes 21242503
chr17 42173553 42173564 ELK4 JASPAR yes 54386488
chr17 42173553 42173564 FLI1 JASPAR yes 54386489
chr17 42173555 42173561 ETS1 JASPAR yes 21242504
chr17 42173555 42173561 SPI1 JASPAR yes 21242505
chr17 42173555 42173561 ETS1 JASPAR yes 54386490
chr17 42173555 42173561 SPI1 JASPAR yes 54386491
chr17 42173582 42173603 IRF1 JASPAR yes 21242506
chr17 42173582 42173603 IRF1 JASPAR yes 54386492
chr17 42173589 42173610 ZNF263 JASPAR yes 21242507
chr17 42173589 42173610 ZNF263 JASPAR yes 54386493
SNP sites on vista24867[chr17:42173326-42173627]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 42173353 rs116971671 A G
ELF1 H1TF2 NFE PHF8 POLR2A SRF
4887887
chr17 42173556 rs184734413 C T
EHF ELF1 ELF3 ELF4 ELF5 ELK1 ELK3 ELK4 ETS1 ETV5 ETV6 FLI1 GABPA IRF1 POLR2A SP1 SPI1 ZNF263
4887888
Genes possibly regulated by vista24867[chr17:42173326-42173627]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 42030106 42081837 - PYY ENSG00000131096.6 42081837 0.99 1.0 15909 8511
chr17 42081914 42086431 + NAGS ENSG00000161653.6 42081914 0.96 1.0 15910 8588
chr17 42088556 42101314 - TMEM101 ENSG00000091947.5 42101314 0.77 1.0 15911 27988
chr17 42112003 42144987 - LSM12 ENSG00000161654.5 42144987 0.88 0.96 15912 71661
chr17 42148103 42153709 + G6PC3 ENSG00000141349.4 42148103 0.66 0.99 15913 74777
chr17 42154114 42201070 - HDAC5 ENSG00000108840.11 42201070 0.62 1.0 15914 72557
chr17 42219274 42239844 + C17orf53 ENSG00000125319.10 42219274 0.91 1.0 15915 54353
chr17 42247815 42256451 + ASB16 ENSG00000161664.2 42247815 0.66 1.0 15916 25812
chr17 42264338 42269099 + TMUB2 ENSG00000168591.11 42264338 0.61 1.0 15917 9289
Expression level of Genes
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miRNAs possibly regulated by vista24867[chr17:42173326-42173627]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results