EnhancerDB
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Enhancers that have rs116971671[chr17:42173353]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 42170662 42193575 enh17179
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr17 42173326 42173627 vista24867
VISTA
Transcript factors that have rs116971671[chr17:42173353]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 42172880 42173420 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108261852
chr17 42172880 42173420 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108261853
chr17 42172907 42173854 POLR2A UCSC Txn Factor no Conserved 108261860
chr17 42172907 42173854 POLR2A UCSC Txn Factor no Conserved 108261861
chr17 42172915 42173639 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21761805
chr17 42172915 42173639 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108261862
chr17 42172915 42173639 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108261863
chr17 42172921 42173385 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21761806
chr17 42172921 42173385 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108261864
chr17 42172921 42173385 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108261865
chr17 42172938 42173374 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21761808
chr17 42172938 42173374 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108261869
chr17 42172938 42173374 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108261870
chr17 42172959 42173595 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108261872
chr17 42172959 42173595 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108261873
chr17 42172964 42173634 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108261876
chr17 42172964 42173634 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108261877
chr17 42172970 42173360 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21761812
chr17 42172970 42173360 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108261880
chr17 42172970 42173360 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108261881
chr17 42172975 42173365 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21761813
chr17 42172975 42173365 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108261883
chr17 42172975 42173365 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108261884
chr17 42172987 42173563 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21761814
chr17 42172987 42173563 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108261885
chr17 42172987 42173563 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108261886
chr17 42172999 42173399 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21761816
chr17 42172999 42173399 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108261888
chr17 42172999 42173399 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108261889
chr17 42173004 42173468 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21761817
chr17 42173004 42173468 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108261891
chr17 42173004 42173468 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108261892
chr17 42173007 42173497 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21761818
chr17 42173007 42173497 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108261893
chr17 42173007 42173497 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108261894
chr17 42173019 42173395 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108261899
chr17 42173019 42173395 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108261900
chr17 42173031 42173487 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21761826
chr17 42173031 42173487 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108261905
chr17 42173031 42173487 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108261906
chr17 42173042 42173622 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108261908
chr17 42173042 42173622 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108261909
chr17 42173049 42173365 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21761829
chr17 42173049 42173365 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108261911
chr17 42173049 42173365 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108261912
chr17 42173056 42173612 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21761830
chr17 42173056 42173612 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108261913
chr17 42173056 42173612 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108261914
chr17 42173066 42173732 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21761832
chr17 42173066 42173732 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108261917
chr17 42173066 42173732 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108261918
chr17 42173074 42173494 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21761835
chr17 42173074 42173494 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108261922
chr17 42173074 42173494 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108261923
chr17 42173080 42173390 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108261925
chr17 42173080 42173390 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108261926
chr17 42173097 42173621 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21761838
chr17 42173097 42173621 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108261928
chr17 42173097 42173621 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108261929
chr17 42173118 42173506 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21761840
chr17 42173118 42173506 PHF8 UCSC Txn Factor no Conserved 108261931
chr17 42173118 42173506 PHF8 UCSC Txn Factor no Conserved 108261932
chr17 42173118 42173506 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108261933
chr17 42173118 42173506 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108261934
chr17 42173131 42173635 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21761842
chr17 42173131 42173635 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108261936
chr17 42173131 42173635 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108261937
chr17 42173188 42173764 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21761844
chr17 42173188 42173764 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108261939
chr17 42173193 42173553 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21761845
chr17 42173193 42173553 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108261940
chr17 42173197 42173847 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21761846
chr17 42173197 42173847 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108261941
chr17 42173206 42173726 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108261942
chr17 42173217 42173567 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108261943
chr17 42173232 42173636 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21761847
chr17 42173232 42173636 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108261944
chr17 42173235 42173691 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21761848
chr17 42173235 42173691 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108261945
chr17 42173237 42173607 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21761849
chr17 42173237 42173607 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21761850
chr17 42173237 42173607 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108261946
chr17 42173237 42173607 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108261947
chr17 42173242 42173572 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21761851
chr17 42173242 42173572 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108261948
chr17 42173253 42173793 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108261949
chr17 42173260 42173636 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21761852
chr17 42173260 42173636 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108261950
chr17 42173270 42173600 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108261951
chr17 42173280 42173570 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21761853
chr17 42173280 42173570 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108261952
chr17 42173287 42173763 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21761854
chr17 42173287 42173763 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108261953
chr17 42173301 42173791 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108261954
chr17 42173307 42173527 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21761855
chr17 42173307 42173527 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108261955
chr17 42173314 42173604 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21761856
chr17 42173314 42173604 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108261956
chr17 42173324 42173688 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21761857
chr17 42173324 42173688 ELF1 UCSC Txn Factor no Conserved 108261957
chr17 42173324 42173688 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108261958
chr17 42173327 42173607 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21761858
chr17 42173327 42173607 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108261959
chr17 42173336 42173692 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21761859
chr17 42173336 42173692 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108261960
chr17 42173349 42173353 H1TF2 TRANSFAC yes 21242453
chr17 42173349 42173353 NFE TRANSFAC yes 21242454
chr17 42173349 42173353 SRF TRANSFAC yes 21242455
chr17 42173349 42173353 H1TF2 TRANSFAC yes 54386439
chr17 42173349 42173353 NFE TRANSFAC yes 54386440
chr17 42173349 42173353 SRF TRANSFAC yes 54386441
Genes associated with rs116971671[chr17:42173353], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 42112003 42144987 - LSM12 ENSG00000161654.5 42144987 28366 Uterus 0.34622 15912