EnhancerDB
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  3. vista24880[chr17:42365739-42366179]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24880[chr17:42365739-42366179]
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Tissue distribution of vista24880
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Transcription factor that possibly regulate vista24880[chr17:42365739-42366179]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 42365345 42366365 POLR2A UCSC Txn Factor no Conserved 108262607
chr17 42365529 42366270 GATA1 UCSC Txn Factor no Conserved 108262608
chr17 42365703 42366053 STAT5A UCSC Txn Factor no Conserved 108262613
chr17 42365722 42366064 TEAD4 UCSC Txn Factor no Conserved 108262618
chr17 42365735 42366138 GATA2 UCSC Txn Factor no Conserved 108262624
chr17 42365750 42366054 TAL1 UCSC Txn Factor no Conserved 108262627
chr17 42365755 42366155 NR2F2 UCSC Txn Factor no Conserved 108262629
chr17 42365817 42365975 EP300 UCSC Txn Factor no Conserved 108262645
chr17 42365906 42366195 ELF1 UCSC Txn Factor no Conserved 108262661
chr17 42365742 42365746 YY1 TRANSFAC yes 21243059
chr17 42365742 42365746 YY1 TRANSFAC yes 54395492
chr17 42365759 42365763 NFE TRANSFAC yes 21243060
chr17 42365759 42365763 NFE TRANSFAC yes 54395493
chr17 42365763 42365778 STAT1 JASPAR yes 21243061
chr17 42365763 42365778 STAT1 JASPAR yes 54395494
chr17 42365765 42365776 STAT1 JASPAR yes 21243062
chr17 42365765 42365776 STAT3 JASPAR yes 21243063
chr17 42365765 42365776 STAT1 JASPAR yes 54395495
chr17 42365765 42365776 STAT3 JASPAR yes 54395496
chr17 42365782 42365796 PLAG1 JASPAR yes 21243064
chr17 42365782 42365796 PLAG1 JASPAR yes 54395497
chr17 42365789 42365793 H4TF2 TRANSFAC yes 21243065
chr17 42365789 42365793 H4TF2 TRANSFAC yes 54395498
chr17 42365795 42365803 GATA1 TRANSFAC yes 21243066
chr17 42365795 42365803 GATA1 TRANSFAC yes 54395499
chr17 42365798 42365802 NFE TRANSFAC yes 21243067
chr17 42365798 42365802 NFE TRANSFAC yes 54395500
chr17 42365798 42365803 GATA1 TRANSFAC yes 21243068
chr17 42365798 42365803 GATA1 TRANSFAC yes 54395501
chr17 42365798 42365804 GATA3 JASPAR yes 21243069
chr17 42365798 42365804 GATA3 JASPAR yes 54395502
chr17 42365805 42365817 ZBTB7B JASPAR yes 21243070
chr17 42365805 42365817 ZBTB7C JASPAR yes 21243071
chr17 42365805 42365817 ZBTB7B JASPAR yes 54395503
chr17 42365805 42365817 ZBTB7C JASPAR yes 54395504
chr17 42365806 42365816 RUNX3 JASPAR yes 21243072
chr17 42365806 42365816 RUNX3 JASPAR yes 54395505
chr17 42365819 42365827 GATA3 JASPAR yes 21243073
chr17 42365819 42365827 GATA3 JASPAR yes 54395506
chr17 42365842 42365863 ZNF263 JASPAR yes 21243074
chr17 42365842 42365863 ZNF263 JASPAR yes 54395507
chr17 42365849 42365853 NFE TRANSFAC yes 21243075
chr17 42365849 42365853 NFE TRANSFAC yes 54395508
chr17 42365855 42365871 GLIS1 JASPAR yes 21243076
chr17 42365855 42365871 GLIS1 JASPAR yes 54395509
chr17 42365856 42365866 ZNF740 JASPAR yes 21243077
chr17 42365856 42365866 ZNF740 JASPAR yes 54395510
chr17 42365859 42365880 ZNF263 JASPAR yes 21243078
chr17 42365859 42365880 ZNF263 JASPAR yes 54395511
chr17 42365872 42365884 E2F8 JASPAR yes 21243079
chr17 42365872 42365884 E2F8 JASPAR yes 54395512
chr17 42365872 42365893 ZNF263 JASPAR yes 21243080
chr17 42365872 42365893 ZNF263 JASPAR yes 54395513
chr17 42365898 42365902 NFE TRANSFAC yes 21243081
chr17 42365898 42365902 NFE TRANSFAC yes 54395514
chr17 42365898 42365903 GATA1 TRANSFAC yes 21243082
chr17 42365898 42365903 GATA1 TRANSFAC yes 54395515
chr17 42365898 42365904 GATA3 JASPAR yes 21243083
chr17 42365898 42365904 GATA3 JASPAR yes 54395516
chr17 42365903 42365914 E2F6 JASPAR yes 21243084
chr17 42365903 42365914 E2F6 JASPAR yes 54395517
chr17 42365930 42365941 NFE2L2 JASPAR yes 21243085
chr17 42365930 42365941 NFE2L2 JASPAR yes 54395518
chr17 42365934 42365938 NFE TRANSFAC yes 21243086
chr17 42365934 42365938 NFE TRANSFAC yes 54395519
chr17 42365936 42365957 ZNF263 JASPAR yes 21243087
chr17 42365936 42365957 ZNF263 JASPAR yes 54395520
chr17 42365948 42365963 TFAP2C JASPAR yes 21243088
chr17 42365948 42365963 TFAP2C JASPAR yes 54395521
chr17 42365965 42365969 NFE TRANSFAC yes 21243089
chr17 42365965 42365969 NFE TRANSFAC yes 54395522
chr17 42365965 42365970 GATA1 TRANSFAC yes 21243090
chr17 42365965 42365970 GATA1 TRANSFAC yes 54395523
chr17 42365965 42365971 GATA3 JASPAR yes 21243091
chr17 42365965 42365971 GATA3 JASPAR yes 54395524
chr17 42365999 42366009 SREBF1 JASPAR yes 21243092
chr17 42365999 42366009 SREBF1 JASPAR yes 54395525
chr17 42366028 42366038 HINFP JASPAR yes 21243093
chr17 42366028 42366038 HINFP JASPAR yes 54395526
chr17 42366028 42366041 ELF3 JASPAR yes 21243094
chr17 42366028 42366041 ELF3 JASPAR yes 54395527
chr17 42366029 42366039 ELK1 JASPAR yes 21243095
chr17 42366029 42366039 ETV6 JASPAR yes 21243096
chr17 42366029 42366039 ELK1 JASPAR yes 54395528
chr17 42366029 42366039 ETV6 JASPAR yes 54395529
chr17 42366029 42366040 ELF5 JASPAR yes 21243097
chr17 42366029 42366040 ELF5 JASPAR yes 54395530
chr17 42366029 42366041 EHF JASPAR yes 21243098
chr17 42366029 42366041 ELF1 JASPAR yes 21243099
chr17 42366029 42366041 ELF4 JASPAR yes 21243100
chr17 42366029 42366041 EHF JASPAR yes 54395531
chr17 42366029 42366041 ELF1 JASPAR yes 54395532
chr17 42366029 42366041 ELF4 JASPAR yes 54395533
chr17 42366029 42366042 ELF1 JASPAR yes 21243101
chr17 42366029 42366042 ELF1 JASPAR yes 54395534
chr17 42366029 42366043 SPI1 JASPAR yes 21243102
chr17 42366029 42366043 SPI1 JASPAR yes 54395535
chr17 42366031 42366037 ETS1 JASPAR yes 21243103
chr17 42366031 42366037 SPI1 JASPAR yes 21243104
chr17 42366031 42366037 ETS1 JASPAR yes 54395536
chr17 42366031 42366037 SPI1 JASPAR yes 54395537
chr17 42366034 42366050 SRF JASPAR yes 21243105
chr17 42366034 42366050 SRF JASPAR yes 54395538
chr17 42366034 42366052 SRF JASPAR yes 21243106
chr17 42366034 42366052 SRF JASPAR yes 54395539
chr17 42366037 42366045 GATA3 JASPAR yes 21243107
chr17 42366037 42366045 GATA5 JASPAR yes 21243108
chr17 42366037 42366045 GATA3 JASPAR yes 54395540
chr17 42366037 42366045 GATA5 JASPAR yes 54395541
chr17 42366040 42366055 NFYB JASPAR yes 21243109
chr17 42366040 42366055 NFYB JASPAR yes 54395542
chr17 42366042 42366058 NFYA JASPAR yes 21243110
chr17 42366042 42366058 NFYA JASPAR yes 54395543
chr17 42366043 42366061 NFYA JASPAR yes 21243111
chr17 42366043 42366061 NFYA JASPAR yes 54395544
chr17 42366047 42366051 H1TF2 TRANSFAC yes 21243112
chr17 42366047 42366051 NFE TRANSFAC yes 21243113
chr17 42366047 42366051 SRF TRANSFAC yes 21243114
chr17 42366047 42366051 H1TF2 TRANSFAC yes 54395545
chr17 42366047 42366051 NFE TRANSFAC yes 54395546
chr17 42366047 42366051 SRF TRANSFAC yes 54395547
chr17 42366081 42366084 MYB TRANSFAC yes 21243115
chr17 42366081 42366084 MYB TRANSFAC yes 54395548
chr17 42366087 42366098 ESRRB JASPAR yes 21243116
chr17 42366087 42366098 ESRRB JASPAR yes 54395549
chr17 42366104 42366119 TP53 JASPAR yes 21243117
chr17 42366104 42366119 TP53 JASPAR yes 54395550
chr17 42366120 42366127 SPI1 JASPAR yes 21243118
chr17 42366120 42366127 SPI1 JASPAR yes 54395551
chr17 42366129 42366132 MYB TRANSFAC yes 21243119
chr17 42366129 42366132 MYB TRANSFAC yes 54395552
chr17 42366136 42366147 NRL JASPAR yes 21243120
chr17 42366136 42366147 NRL JASPAR yes 54395553
chr17 42366136 42366148 POU2F1 JASPAR yes 21243121
chr17 42366136 42366148 POU2F1 JASPAR yes 54395554
chr17 42366136 42366149 POU3F3 JASPAR yes 21243122
chr17 42366136 42366149 POU3F3 JASPAR yes 54395555
chr17 42366137 42366149 POU3F1 JASPAR yes 21243123
chr17 42366137 42366149 POU3F1 JASPAR yes 54395556
chr17 42366138 42366147 POU3F4 JASPAR yes 21243124
chr17 42366138 42366147 POU5F1B JASPAR yes 21243125
chr17 42366138 42366147 POU3F4 JASPAR yes 54395557
chr17 42366138 42366147 POU5F1B JASPAR yes 54395558
chr17 42366144 42366156 POU2F1 JASPAR yes 21243126
chr17 42366144 42366156 POU2F1 JASPAR yes 54395559
chr17 42366144 42366157 POU3F3 JASPAR yes 21243127
chr17 42366144 42366157 POU3F3 JASPAR yes 54395560
chr17 42366144 42366158 POU1F1 JASPAR yes 21243128
chr17 42366144 42366158 POU1F1 JASPAR yes 54395561
chr17 42366145 42366157 POU3F1 JASPAR yes 21243129
chr17 42366145 42366157 POU3F2 JASPAR yes 21243130
chr17 42366145 42366157 POU3F1 JASPAR yes 54395562
chr17 42366145 42366157 POU3F2 JASPAR yes 54395563
chr17 42366146 42366155 POU3F4 JASPAR yes 21243131
chr17 42366146 42366155 POU5F1B JASPAR yes 21243132
chr17 42366146 42366155 POU3F4 JASPAR yes 54395564
chr17 42366146 42366155 POU5F1B JASPAR yes 54395565
chr17 42366159 42366163 NFE TRANSFAC yes 21243133
chr17 42366159 42366163 NFE TRANSFAC yes 54395566
chr17 42366162 42366183 IRF1 JASPAR yes 21243134
chr17 42366162 42366183 IRF1 JASPAR yes 54395567
chr17 42366165 42366179 SPI1 JASPAR yes 21243135
chr17 42366165 42366179 SPIC JASPAR yes 21243136
chr17 42366165 42366179 SPI1 JASPAR yes 54395568
chr17 42366165 42366179 SPIC JASPAR yes 54395569
chr17 42366179 42366186 SPIB JASPAR yes 21243137
chr17 42366179 42366186 SPIB JASPAR yes 54395570
SNP sites on vista24880[chr17:42365739-42366179]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 42365797 rs73983966 T G
GATA1 GATA2 NR2F2 POLR2A STAT5A TAL1 TEAD4
4889106
chr17 42365859 rs73983967 C A,T
EP300 GATA1 GATA2 GLIS1 NR2F2 POLR2A STAT5A TAL1 TEAD4 ZNF263 ZNF740
4889107
chr17 42365860 rs78365143 C T
EP300 GATA1 GATA2 GLIS1 NR2F2 POLR2A STAT5A TAL1 TEAD4 ZNF263 ZNF740
4889108
chr17 42365874 rs185227996 C T
E2F8 EP300 GATA1 GATA2 NR2F2 POLR2A STAT5A TAL1 TEAD4 ZNF263
4889109
chr17 42365890 rs80180232 C A,T
EP300 GATA1 GATA2 NR2F2 POLR2A STAT5A TAL1 TEAD4 ZNF263
4889110
chr17 42366013 rs73983968 C T
ELF1 GATA1 GATA2 NR2F2 POLR2A STAT5A TAL1 TEAD4
4889111
chr17 42366174 rs145501947 G A,C
ELF1 GATA1 IRF1 POLR2A SPI1 SPIC
4889112
Genes possibly regulated by vista24880[chr17:42365739-42366179]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 42269173 42277481 - ATXN7L3 ENSG00000087152.11 42277481 0.6 1.0 15918 11742
chr17 42282401 42298994 - UBTF ENSG00000108312.10 42298994 0.74 0.99 15919 33255
chr17 42325753 42345509 - SLC4A1 ENSG00000004939.9 42345509 0.93 0.97 15920 79770
chr17 42325758 42327236 - AC003102.1 ENSG00000214921.2 42327236 0.97 0.96 15921 61497
chr17 42335297 42355825 + AC003043.1 ENSG00000268413.1 42335297 0.0 0.0 15922 69558
chr17 42385781 42396039 + RUNDC3A ENSG00000108309.8 42385781 0.83 1.0 15923 80398
chr17 42396993 42402238 - SLC25A39 ENSG00000013306.11 42402238 0.66 1.0 15924 63941
chr17 42422614 42430470 + GRN ENSG00000030582.12 42422614 0.72 1.0 15925 43565
chr17 42430583 42441243 - FAM171A2 ENSG00000161682.10 42441243 0.94 1.0 15926 24936
Expression level of Genes
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miRNAs possibly regulated by vista24880[chr17:42365739-42366179]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results