EnhancerDB
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  3. vista24926[chr17:43423230-43423453]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24926[chr17:43423230-43423453]
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Tissue distribution of vista24926
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Transcription factor that possibly regulate vista24926[chr17:43423230-43423453]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 43422703 43423443 KAP1 UCSC Txn Factor no Conserved 108264858
chr17 43422888 43423244 RCOR1 UCSC Txn Factor no Conserved 108264868
chr17 43422925 43423262 TEAD4 UCSC Txn Factor no Conserved 108264875
chr17 43422933 43423237 GATA2 UCSC Txn Factor no Conserved 108264880
chr17 43422934 43423247 PML UCSC Txn Factor no Conserved 108264882
chr17 43423042 43423243 SPI1 UCSC Txn Factor no Conserved 108264886
chr17 43423222 43423237 RUNX2 JASPAR yes 21245673
chr17 43423222 43423237 RUNX2 JASPAR yes 54447164
chr17 43423225 43423236 RUNX1 JASPAR yes 21245674
chr17 43423225 43423236 RUNX1 JASPAR yes 54447165
chr17 43423227 43423236 RUNX2 JASPAR yes 21245675
chr17 43423227 43423236 RUNX2 JASPAR yes 54447166
chr17 43423235 43423244 VENTX JASPAR yes 21245676
chr17 43423235 43423244 VENTX JASPAR yes 54447167
chr17 43423235 43423245 GBX2 JASPAR yes 21245677
chr17 43423235 43423245 GSX2 JASPAR yes 21245678
chr17 43423235 43423245 MNX1 JASPAR yes 21245679
chr17 43423235 43423245 RAX JASPAR yes 21245680
chr17 43423235 43423245 GBX2 JASPAR yes 54447168
chr17 43423235 43423245 GSX2 JASPAR yes 54447169
chr17 43423235 43423245 MNX1 JASPAR yes 54447170
chr17 43423235 43423245 RAX JASPAR yes 54447171
chr17 43423236 43423244 BARX1 JASPAR yes 21245681
chr17 43423236 43423244 BSX JASPAR yes 21245682
chr17 43423236 43423244 ISL2 JASPAR yes 21245683
chr17 43423236 43423244 LMX1B JASPAR yes 21245684
chr17 43423236 43423244 MSX1 JASPAR yes 21245685
chr17 43423236 43423244 MSX2 JASPAR yes 21245686
chr17 43423236 43423244 BARX1 JASPAR yes 54447172
chr17 43423236 43423244 BSX JASPAR yes 54447173
chr17 43423236 43423244 ISL2 JASPAR yes 54447174
chr17 43423236 43423244 LMX1B JASPAR yes 54447175
chr17 43423236 43423244 MSX1 JASPAR yes 54447176
chr17 43423236 43423244 MSX2 JASPAR yes 54447177
chr17 43423239 43423249 HESX1 JASPAR yes 21245687
chr17 43423239 43423249 RAX JASPAR yes 21245688
chr17 43423239 43423249 HESX1 JASPAR yes 54447178
chr17 43423239 43423249 RAX JASPAR yes 54447179
chr17 43423240 43423248 ISX JASPAR yes 21245689
chr17 43423240 43423248 LHX9 JASPAR yes 21245690
chr17 43423240 43423248 LMX1B JASPAR yes 21245691
chr17 43423240 43423248 PRRX1 JASPAR yes 21245692
chr17 43423240 43423248 RAX2 JASPAR yes 21245693
chr17 43423240 43423248 SHOX JASPAR yes 21245694
chr17 43423240 43423248 UNCX JASPAR yes 21245695
chr17 43423240 43423248 ISX JASPAR yes 54447180
chr17 43423240 43423248 LHX9 JASPAR yes 54447181
chr17 43423240 43423248 LMX1B JASPAR yes 54447182
chr17 43423240 43423248 PRRX1 JASPAR yes 54447183
chr17 43423240 43423248 RAX2 JASPAR yes 54447184
chr17 43423240 43423248 SHOX JASPAR yes 54447185
chr17 43423240 43423248 UNCX JASPAR yes 54447186
chr17 43423241 43423251 PAX3 JASPAR yes 21245696
chr17 43423241 43423251 PAX7 JASPAR yes 21245697
chr17 43423241 43423251 PAX3 JASPAR yes 54447187
chr17 43423241 43423251 PAX7 JASPAR yes 54447188
chr17 43423241 43423256 MAFK JASPAR yes 21245698
chr17 43423241 43423256 MAFK JASPAR yes 54447189
chr17 43423254 43423265 CDX2 JASPAR yes 21245699
chr17 43423254 43423265 CDX2 JASPAR yes 54447190
chr17 43423259 43423274 STAT1 JASPAR yes 21245700
chr17 43423259 43423274 STAT1 JASPAR yes 54447191
chr17 43423261 43423272 STAT1 JASPAR yes 21245701
chr17 43423261 43423272 STAT3 JASPAR yes 21245702
chr17 43423261 43423272 STAT1 JASPAR yes 54447192
chr17 43423261 43423272 STAT3 JASPAR yes 54447193
chr17 43423277 43423283 HiNF-A TRANSFAC yes 21245703
chr17 43423277 43423283 HiNF-A TRANSFAC yes 54447194
chr17 43423279 43423291 POU3F1 JASPAR yes 21245704
chr17 43423279 43423291 POU3F2 JASPAR yes 21245705
chr17 43423279 43423291 POU3F1 JASPAR yes 54447195
chr17 43423279 43423291 POU3F2 JASPAR yes 54447196
chr17 43423280 43423290 NFATC3 JASPAR yes 21245706
chr17 43423280 43423290 NFATC3 JASPAR yes 54447197
chr17 43423282 43423292 RELA JASPAR yes 21245707
chr17 43423282 43423292 REL JASPAR yes 21245708
chr17 43423282 43423292 RELA JASPAR yes 54447198
chr17 43423282 43423292 REL JASPAR yes 54447199
chr17 43423282 43423293 NFKB1 JASPAR yes 21245709
chr17 43423282 43423293 NFKB1 JASPAR yes 54447200
chr17 43423283 43423293 RELA JASPAR yes 21245710
chr17 43423283 43423293 REL JASPAR yes 21245711
chr17 43423283 43423293 RELA JASPAR yes 54447201
chr17 43423283 43423293 REL JASPAR yes 54447202
chr17 43423293 43423311 NR3C1 JASPAR yes 21245712
chr17 43423293 43423311 NR3C1 JASPAR yes 54447203
chr17 43423308 43423312 TEAD2 TRANSFAC yes 21245713
chr17 43423308 43423312 TEAD2 TRANSFAC yes 54447204
chr17 43423308 43423313 TBP TRANSFAC yes 21245714
chr17 43423308 43423313 TBP TRANSFAC yes 54447205
chr17 43423318 43423328 HOXC10 JASPAR yes 21245715
chr17 43423318 43423328 HOXD13 JASPAR yes 21245716
chr17 43423318 43423328 HOXC10 JASPAR yes 54447206
chr17 43423318 43423328 HOXD13 JASPAR yes 54447207
chr17 43423318 43423329 HOXC13 JASPAR yes 21245717
chr17 43423318 43423329 HOXC13 JASPAR yes 54447208
chr17 43423319 43423329 GSX1 JASPAR yes 21245718
chr17 43423319 43423329 GSX2 JASPAR yes 21245719
chr17 43423319 43423329 GSX1 JASPAR yes 54447209
chr17 43423319 43423329 GSX2 JASPAR yes 54447210
chr17 43423320 43423328 NKX6-1 JASPAR yes 21245720
chr17 43423320 43423328 NKX6-2 JASPAR yes 21245721
chr17 43423320 43423328 NKX6-1 JASPAR yes 54447211
chr17 43423320 43423328 NKX6-2 JASPAR yes 54447212
chr17 43423320 43423330 POU6F2 JASPAR yes 21245722
chr17 43423320 43423330 POU6F2 JASPAR yes 54447213
chr17 43423381 43423386 SP1 TRANSFAC yes 21245723
chr17 43423381 43423386 SP1 TRANSFAC yes 54447214
chr17 43423388 43423395 ETS1 TRANSFAC yes 21245724
chr17 43423388 43423395 ETS1 TRANSFAC yes 54447215
chr17 43423388 43423399 FLI1 JASPAR yes 21245725
chr17 43423388 43423399 FLI1 JASPAR yes 54447216
chr17 43423393 43423412 REST JASPAR yes 21245726
chr17 43423393 43423412 REST JASPAR yes 54447217
chr17 43423423 43423438 FOXP1 JASPAR yes 21245727
chr17 43423423 43423438 FOXP1 JASPAR yes 54447218
chr17 43423424 43423435 FOXP2 JASPAR yes 21245728
chr17 43423424 43423435 FOXP2 JASPAR yes 54447219
chr17 43423424 43423445 IRF1 JASPAR yes 21245729
chr17 43423424 43423445 IRF1 JASPAR yes 54447220
chr17 43423425 43423446 IRF1 JASPAR yes 21245730
chr17 43423425 43423446 IRF1 JASPAR yes 54447221
chr17 43423426 43423447 IRF1 JASPAR yes 21245731
chr17 43423426 43423447 IRF1 JASPAR yes 54447222
chr17 43423430 43423451 IRF1 JASPAR yes 21245732
chr17 43423430 43423451 IRF1 JASPAR yes 54447223
chr17 43423431 43423446 FOXP1 JASPAR yes 21245733
chr17 43423431 43423446 FOXP1 JASPAR yes 54447224
chr17 43423431 43423452 IRF1 JASPAR yes 21245734
chr17 43423431 43423452 IRF1 JASPAR yes 54447225
chr17 43423433 43423454 ZNF263 JASPAR yes 21245735
chr17 43423433 43423454 ZNF263 JASPAR yes 54447226
chr17 43423435 43423456 IRF1 JASPAR yes 21245736
chr17 43423435 43423456 IRF1 JASPAR yes 54447227
chr17 43423436 43423451 FOXP1 JASPAR yes 21245737
chr17 43423436 43423451 FOXP1 JASPAR yes 54447228
chr17 43423437 43423452 STAT2 JASPAR yes 21245738
chr17 43423437 43423452 STAT2 JASPAR yes 54447229
chr17 43423445 43423457 E2F8 JASPAR yes 21245739
chr17 43423445 43423457 E2F8 JASPAR yes 54447230
chr17 43423449 43423455 MZF1 JASPAR yes 21245740
chr17 43423449 43423455 MZF1 JASPAR yes 54447231
SNP sites on vista24926[chr17:43423230-43423453]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 43423284 rs115484089 G T
KAP1 NFATC3 NFKB1 POU3F1 POU3F2 REL RELA
4895447
chr17 43423441 rs539687924 C CT
FOXP1 IRF1 KAP1 STAT2 ZNF263
4895448
Genes possibly regulated by vista24926[chr17:43423230-43423453]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 43331760 43339479 - SPATA32 ENSG00000184361.8 43339479 0.93 1.0 15949 16249
chr17 43471275 43511787 - ARHGAP27 ENSG00000159314.7 43511787 0.81 0.94 15950 11666
Expression level of Genes
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miRNAs possibly regulated by vista24926[chr17:43423230-43423453]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results