EnhancerDB
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  3. rs539687924[chr17:43423441]
Enhancers that have rs539687924[chr17:43423441]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 43404711 43426395 enh17187
Bone Marrow (K562) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Lung Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Placenta Colon (HCT116) Lung (PC-9) Uterus Thymus Heart
chr17 43423230 43423453 vista24926
VISTA
Transcript factors that have rs539687924[chr17:43423441]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 43422703 43423443 KAP1 UCSC Txn Factor no Conserved 108264858
chr17 43423424 43423445 IRF1 JASPAR yes 21245729
chr17 43423424 43423445 IRF1 JASPAR yes 54447220
chr17 43423425 43423446 IRF1 JASPAR yes 21245730
chr17 43423425 43423446 IRF1 JASPAR yes 54447221
chr17 43423426 43423447 IRF1 JASPAR yes 21245731
chr17 43423426 43423447 IRF1 JASPAR yes 54447222
chr17 43423430 43423451 IRF1 JASPAR yes 21245732
chr17 43423430 43423451 IRF1 JASPAR yes 54447223
chr17 43423431 43423446 FOXP1 JASPAR yes 21245733
chr17 43423431 43423446 FOXP1 JASPAR yes 54447224
chr17 43423431 43423452 IRF1 JASPAR yes 21245734
chr17 43423431 43423452 IRF1 JASPAR yes 54447225
chr17 43423433 43423454 ZNF263 JASPAR yes 21245735
chr17 43423433 43423454 ZNF263 JASPAR yes 54447226
chr17 43423435 43423456 IRF1 JASPAR yes 21245736
chr17 43423435 43423456 IRF1 JASPAR yes 54447227
chr17 43423436 43423451 FOXP1 JASPAR yes 21245737
chr17 43423436 43423451 FOXP1 JASPAR yes 54447228
chr17 43423437 43423452 STAT2 JASPAR yes 21245738
chr17 43423437 43423452 STAT2 JASPAR yes 54447229
Genes associated with rs539687924[chr17:43423441], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More