EnhancerDB
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  3. vista25000[chr17:46072548-46072940]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25000[chr17:46072548-46072940]
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Tissue distribution of vista25000
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Transcription factor that possibly regulate vista25000[chr17:46072548-46072940]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 46072550 46072564 PLAG1 JASPAR yes 21248962
chr17 46072550 46072564 PLAG1 JASPAR yes 54550351
chr17 46072551 46072555 H4TF2 TRANSFAC yes 21248963
chr17 46072551 46072555 H4TF2 TRANSFAC yes 54550352
chr17 46072559 46072564 TFAP2A TRANSFAC yes 21248964
chr17 46072559 46072564 TFAP2A TRANSFAC yes 54550353
chr17 46072559 46072565 MZF1 JASPAR yes 21248965
chr17 46072559 46072565 MZF1 JASPAR yes 54550354
chr17 46072566 46072576 SP1 JASPAR yes 21248966
chr17 46072566 46072576 SP1 JASPAR yes 54550355
chr17 46072596 46072606 SP1 JASPAR yes 21248967
chr17 46072596 46072606 SP1 JASPAR yes 54550356
chr17 46072597 46072604 CEBPA TRANSFAC yes 21248968
chr17 46072597 46072604 CEBPA TRANSFAC yes 54550357
chr17 46072603 46072614 NFKB1 JASPAR yes 21248969
chr17 46072603 46072614 NFKB1 JASPAR yes 54550358
chr17 46072610 46072631 ZNF263 JASPAR yes 21248970
chr17 46072610 46072631 ZNF263 JASPAR yes 54550359
chr17 46072613 46072627 PLAG1 JASPAR yes 21248971
chr17 46072613 46072627 PLAG1 JASPAR yes 54550360
chr17 46072616 46072636 RREB1 JASPAR yes 21248972
chr17 46072616 46072636 RREB1 JASPAR yes 54550361
chr17 46072616 46072637 ZNF263 JASPAR yes 21248973
chr17 46072616 46072637 ZNF263 JASPAR yes 54550362
chr17 46072619 46072633 PLAG1 JASPAR yes 21248974
chr17 46072619 46072633 PLAG1 JASPAR yes 54550363
chr17 46072620 46072630 SP1 JASPAR yes 21248975
chr17 46072620 46072630 SP1 JASPAR yes 54550364
chr17 46072621 46072631 SP1 JASPAR yes 21248976
chr17 46072621 46072631 SP1 JASPAR yes 54550365
chr17 46072623 46072633 ZNF740 JASPAR yes 21248977
chr17 46072623 46072633 ZNF740 JASPAR yes 54550366
chr17 46072626 46072636 SP1 JASPAR yes 21248978
chr17 46072626 46072636 SP1 JASPAR yes 54550367
chr17 46072627 46072646 REST JASPAR yes 21248979
chr17 46072627 46072646 REST JASPAR yes 54550368
chr17 46072635 46072648 SMAD2 JASPAR yes 21248980
chr17 46072635 46072648 SMAD2 JASPAR yes 54550369
chr17 46072677 46072686 SOX9 JASPAR yes 21248981
chr17 46072677 46072686 SOX9 JASPAR yes 54550370
chr17 46072704 46072714 SP1 JASPAR yes 21248982
chr17 46072704 46072714 SP1 JASPAR yes 54550371
chr17 46072706 46072711 SP1 TRANSFAC yes 21248983
chr17 46072706 46072711 SP1 TRANSFAC yes 54550372
chr17 46072706 46072712 SP1 TRANSFAC yes 21248984
chr17 46072706 46072712 SP1 TRANSFAC yes 54550373
chr17 46072729 46072733 ESR1 TRANSFAC yes 21248985
chr17 46072729 46072733 ESR1 TRANSFAC yes 54550374
chr17 46072741 46072752 NFKB1 JASPAR yes 21248986
chr17 46072741 46072752 NFKB1 JASPAR yes 54550375
chr17 46072742 46072746 LFA1 TRANSFAC yes 21248987
chr17 46072742 46072746 LFA1 TRANSFAC yes 54550376
chr17 46072742 46072752 NFKB1 JASPAR yes 21248988
chr17 46072742 46072752 NFKB1 JASPAR yes 54550377
chr17 46072748 46072754 SP1 TRANSFAC yes 21248989
chr17 46072748 46072754 SP1 TRANSFAC yes 54550378
chr17 46072748 46072758 SP1 JASPAR yes 21248990
chr17 46072748 46072758 SP1 JASPAR yes 54550379
chr17 46072748 46072769 ZNF263 JASPAR yes 21248991
chr17 46072748 46072769 ZNF263 JASPAR yes 54550380
chr17 46072751 46072761 MZF1 JASPAR yes 21248992
chr17 46072751 46072761 MZF1 JASPAR yes 54550381
chr17 46072751 46072763 INSM1 JASPAR yes 21248993
chr17 46072751 46072763 INSM1 JASPAR yes 54550382
chr17 46072756 46072767 E2F6 JASPAR yes 21248994
chr17 46072756 46072767 E2F6 JASPAR yes 54550383
chr17 46072768 46072782 TCF7L2 JASPAR yes 21248995
chr17 46072768 46072782 TCF7L2 JASPAR yes 54550384
chr17 46072769 46072783 NR2F1 JASPAR yes 21248996
chr17 46072769 46072783 NR2F1 JASPAR yes 54550385
chr17 46072772 46072778 TCF1 TRANSFAC yes 21248997
chr17 46072772 46072778 TCF1 TRANSFAC yes 54550386
chr17 46072778 46072793 TFAP2A JASPAR yes 21248998
chr17 46072778 46072793 TFAP2A JASPAR yes 54550387
chr17 46072785 46072798 NFKB2 JASPAR yes 21248999
chr17 46072785 46072798 NFKB2 JASPAR yes 54550388
chr17 46072791 46072794 MYB TRANSFAC yes 21249000
chr17 46072791 46072794 MYB TRANSFAC yes 54550389
chr17 46072794 46072813 RFX2 JASPAR yes 21249001
chr17 46072794 46072813 RFX2 JASPAR yes 54550390
chr17 46072796 46072811 RFX5 JASPAR yes 21249002
chr17 46072796 46072811 RFX5 JASPAR yes 54550391
chr17 46072801 46072815 PLAG1 JASPAR yes 21249003
chr17 46072801 46072815 PLAG1 JASPAR yes 54550392
chr17 46072806 46072819 NFKB1 JASPAR yes 21249004
chr17 46072806 46072819 NFKB2 JASPAR yes 21249005
chr17 46072806 46072819 NFKB1 JASPAR yes 54550393
chr17 46072806 46072819 NFKB2 JASPAR yes 54550394
chr17 46072807 46072812 SP1 TRANSFAC yes 21249006
chr17 46072807 46072812 SP1 TRANSFAC yes 54550395
chr17 46072807 46072818 NFKB1 JASPAR yes 21249007
chr17 46072807 46072818 NFKB1 JASPAR yes 54550396
chr17 46072833 46072840 SP1 TRANSFAC yes 21249008
chr17 46072833 46072840 SP1 TRANSFAC yes 54550397
chr17 46072835 46072840 SP1 TRANSFAC yes 21249009
chr17 46072835 46072840 SP1 TRANSFAC yes 54550398
chr17 46072837 46072848 NRF1 JASPAR yes 21249010
chr17 46072837 46072848 NRF1 JASPAR yes 54550399
chr17 46072841 46072847 NFE2 TRANSFAC yes 21249011
chr17 46072841 46072847 NFE2 TRANSFAC yes 54550400
chr17 46072912 46072922 RORA JASPAR yes 21249012
chr17 46072912 46072922 RORA JASPAR yes 54550401
chr17 46072913 46072926 NR2F1 JASPAR yes 21249013
chr17 46072913 46072926 NR2F1 JASPAR yes 54550402
chr17 46072914 46072922 CREB1 JASPAR yes 21249014
chr17 46072914 46072922 CREB1 JASPAR yes 54550403
chr17 46072916 46072933 RARA JASPAR yes 21249015
chr17 46072916 46072933 RARA JASPAR yes 54550404
chr17 46072917 46072921 ESR1 TRANSFAC yes 21249016
chr17 46072917 46072921 ESR1 TRANSFAC yes 54550405
chr17 46072927 46072937 NFKB1 JASPAR yes 21249017
chr17 46072927 46072937 NFKB1 JASPAR yes 54550406
chr17 46072927 46072938 NFKB1 JASPAR yes 21249018
chr17 46072927 46072938 NFKB1 JASPAR yes 54550407
chr17 46072931 46072935 H4TF2 TRANSFAC yes 21249019
chr17 46072931 46072935 H4TF2 TRANSFAC yes 54550408
SNP sites on vista25000[chr17:46072548-46072940]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 46072606 rs184668126 G A
NFKB1 SP1
4907204
chr17 46072665 rs2597166 G A no 4907205
chr17 46072667 rs576901634 G T no 4907206
chr17 46072680 rs141608552 A G
SOX9
4907207
chr17 46072710 rs77563750 G A
SP1
4907208
Genes possibly regulated by vista25000[chr17:46072548-46072940]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 45973516 46006323 + SP2 ENSG00000167182.11 45973516 0.62 1.0 15981 968
chr17 46018872 46025654 + PNPO ENSG00000108439.5 46018872 0.82 0.99 15982 46324
chr17 46029333 46035244 - PRR15L ENSG00000167183.2 46035244 0.86 0.98 15983 62696
chr17 46045176 46059140 + CDK5RAP3 ENSG00000108465.10 46045176 0.76 1.0 15984 72628
chr17 46103533 46115392 - COPZ2 ENSG00000005243.5 46115392 0.68 0.88 15985 57548
chr17 46125691 46138849 + NFE2L1 ENSG00000082641.11 46125691 0.7 1.0 15986 47249
Expression level of Genes
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miRNAs possibly regulated by vista25000[chr17:46072548-46072940]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results