EnhancerDB
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  3. rs2597166[chr17:46072665]
Enhancers that have rs2597166[chr17:46072665]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 46058151 46084696 enh4448
Liver Astrocyte Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
chr17 46072548 46072940 vista25000
VISTA
Transcript factors that have rs2597166[chr17:46072665]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 46072230 46074321 ZBTB33 GTRD no Lung (A549) 108267607
chr17 46072230 46074321 ZBTB33 GTRD no Lung (A549) 108267608
chr17 46072462 46073637 ZBTB33 GTRD no Brain (SK-N-SH) 21767334
chr17 46072462 46073637 ZBTB33 GTRD no Brain (SK-N-SH) 108267610
chr17 46072462 46073637 ZBTB33 GTRD no Brain (SK-N-SH) 108267611
chr17 46072500 46073630 ZBTB33 GTRD no Brain (SK-N-SH) 21767335
chr17 46072500 46073630 ZBTB33 GTRD no Brain (SK-N-SH) 108267612
chr17 46072500 46073630 ZBTB33 GTRD no Brain (SK-N-SH) 108267613
chr17 46072652 46073563 ZBTB33 GTRD no Brain (SK-N-SH) 21767336
chr17 46072652 46073563 ZBTB33 GTRD no Brain (SK-N-SH) 108267614
chr17 46072652 46073563 ZBTB33 GTRD no Brain (SK-N-SH) 108267615
Genes associated with rs2597166[chr17:46072665], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 46045176 46059140 + CDK5RAP3 ENSG00000108465.10 46045176 13525 Spleen 0.0525658 15984