EnhancerDB
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  3. vista25006[chr17:46089554-46089940]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25006[chr17:46089554-46089940]
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Tissue distribution of vista25006
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Transcription factor that possibly regulate vista25006[chr17:46089554-46089940]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 46089559 46089577 NR3C1 JASPAR yes 21249344
chr17 46089559 46089577 NR3C1 JASPAR yes 54552900
chr17 46089568 46089579 E2F6 JASPAR yes 21249345
chr17 46089568 46089579 E2F6 JASPAR yes 54552901
chr17 46089578 46089582 YY1 TRANSFAC yes 21249346
chr17 46089578 46089582 YY1 TRANSFAC yes 54552902
chr17 46089590 46089594 YY1 TRANSFAC yes 21249347
chr17 46089590 46089594 YY1 TRANSFAC yes 54552903
chr17 46089596 46089614 NFYA JASPAR yes 21249348
chr17 46089596 46089614 NFYA JASPAR yes 54552904
chr17 46089599 46089615 NFYA JASPAR yes 21249349
chr17 46089599 46089615 NFYA JASPAR yes 54552905
chr17 46089602 46089617 NFYB JASPAR yes 21249350
chr17 46089602 46089617 NFYB JASPAR yes 54552906
chr17 46089611 46089616 MYC TRANSFAC yes 21249351
chr17 46089611 46089616 MYC TRANSFAC yes 54552907
chr17 46089620 46089638 IRF2 JASPAR yes 21249352
chr17 46089620 46089638 IRF2 JASPAR yes 54552908
chr17 46089621 46089642 IRF1 JASPAR yes 21249353
chr17 46089621 46089642 IRF1 JASPAR yes 54552909
chr17 46089623 46089638 STAT2 JASPAR yes 21249354
chr17 46089623 46089638 STAT2 JASPAR yes 54552910
chr17 46089624 46089638 STAT1 JASPAR yes 21249355
chr17 46089624 46089638 STAT1 JASPAR yes 54552911
chr17 46089625 46089639 IRF7 JASPAR yes 21249356
chr17 46089625 46089639 IRF8 JASPAR yes 21249357
chr17 46089625 46089639 IRF7 JASPAR yes 54552912
chr17 46089625 46089639 IRF8 JASPAR yes 54552913
chr17 46089625 46089640 IRF9 JASPAR yes 21249358
chr17 46089625 46089640 IRF9 JASPAR yes 54552914
chr17 46089633 46089641 E2F1 JASPAR yes 21249359
chr17 46089633 46089641 E2F1 JASPAR yes 54552915
chr17 46089641 46089646 SP1 TRANSFAC yes 21249360
chr17 46089641 46089646 SP1 TRANSFAC yes 54552916
chr17 46089642 46089652 ZNF740 JASPAR yes 21249361
chr17 46089642 46089652 ZNF740 JASPAR yes 54552917
chr17 46089649 46089661 NHLH1 JASPAR yes 21249362
chr17 46089649 46089661 NHLH1 JASPAR yes 54552918
chr17 46089656 46089667 NRF1 JASPAR yes 21249363
chr17 46089656 46089667 NRF1 JASPAR yes 54552919
chr17 46089657 46089668 NRF1 JASPAR yes 21249364
chr17 46089657 46089668 NRF1 JASPAR yes 54552920
chr17 46089664 46089676 INSM1 JASPAR yes 21249365
chr17 46089664 46089676 INSM1 JASPAR yes 54552921
chr17 46089689 46089695 TCF4 TRANSFAC yes 21249366
chr17 46089689 46089695 TCF4 TRANSFAC yes 54552922
chr17 46089692 46089705 ZBTB18 JASPAR yes 21249367
chr17 46089692 46089705 ZBTB18 JASPAR yes 54552923
chr17 46089694 46089706 TAL1 JASPAR yes 21249368
chr17 46089694 46089706 TAL1 JASPAR yes 54552924
chr17 46089736 46089749 TFAP2A JASPAR yes 21249369
chr17 46089736 46089749 TFAP2B JASPAR yes 21249370
chr17 46089736 46089749 TFAP2C JASPAR yes 21249371
chr17 46089736 46089749 TFAP2A JASPAR yes 54552925
chr17 46089736 46089749 TFAP2B JASPAR yes 54552926
chr17 46089736 46089749 TFAP2C JASPAR yes 54552927
chr17 46089747 46089766 RFX2 JASPAR yes 21249372
chr17 46089747 46089766 RFX2 JASPAR yes 54552928
chr17 46089749 46089764 RFX5 JASPAR yes 21249373
chr17 46089749 46089764 RFX5 JASPAR yes 54552929
chr17 46089751 46089767 RFX2 JASPAR yes 21249374
chr17 46089751 46089767 RFX3 JASPAR yes 21249375
chr17 46089751 46089767 RFX4 JASPAR yes 21249376
chr17 46089751 46089767 RFX5 JASPAR yes 21249377
chr17 46089751 46089767 RFX2 JASPAR yes 54552930
chr17 46089751 46089767 RFX3 JASPAR yes 54552931
chr17 46089751 46089767 RFX4 JASPAR yes 54552932
chr17 46089751 46089767 RFX5 JASPAR yes 54552933
chr17 46089752 46089771 RFX2 JASPAR yes 21249378
chr17 46089752 46089771 RFX2 JASPAR yes 54552934
chr17 46089766 46089771 SP1 TRANSFAC yes 21249379
chr17 46089766 46089771 SP1 TRANSFAC yes 54552935
chr17 46089766 46089772 SP1 TRANSFAC yes 21249380
chr17 46089766 46089772 SP1 TRANSFAC yes 54552936
chr17 46089769 46089774 SP1 TRANSFAC yes 21249381
chr17 46089769 46089774 SP1 TRANSFAC yes 54552937
chr17 46089771 46089785 ZIC1 JASPAR yes 21249382
chr17 46089771 46089785 ZIC1 JASPAR yes 54552938
chr17 46089771 46089786 ZIC4 JASPAR yes 21249383
chr17 46089771 46089786 ZIC4 JASPAR yes 54552939
chr17 46089779 46089794 RFX5 JASPAR yes 21249384
chr17 46089779 46089794 RFX5 JASPAR yes 54552940
chr17 46089780 46089784 NFE TRANSFAC yes 21249385
chr17 46089780 46089784 NFE TRANSFAC yes 54552941
chr17 46089795 46089799 NFE TRANSFAC yes 21249386
chr17 46089795 46089799 NFE TRANSFAC yes 54552942
chr17 46089838 46089848 NEUROD2 JASPAR yes 21249387
chr17 46089838 46089848 NEUROD2 JASPAR yes 54552943
chr17 46089861 46089882 ZNF263 JASPAR yes 21249388
chr17 46089861 46089882 ZNF263 JASPAR yes 54552944
chr17 46089864 46089879 NR2C2 JASPAR yes 21249389
chr17 46089864 46089879 NR2C2 JASPAR yes 54552945
chr17 46089864 46089885 ZNF263 JASPAR yes 21249390
chr17 46089864 46089885 ZNF263 JASPAR yes 54552946
chr17 46089865 46089871 SP1 TRANSFAC yes 21249391
chr17 46089865 46089871 SP1 TRANSFAC yes 54552947
chr17 46089865 46089875 SP1 JASPAR yes 21249392
chr17 46089865 46089875 SP1 JASPAR yes 54552948
chr17 46089865 46089886 ZNF263 JASPAR yes 21249393
chr17 46089865 46089886 ZNF263 JASPAR yes 54552949
chr17 46089866 46089876 SP1 JASPAR yes 21249394
chr17 46089866 46089876 SP1 JASPAR yes 54552950
chr17 46089866 46089887 ZNF263 JASPAR yes 21249395
chr17 46089866 46089887 ZNF263 JASPAR yes 54552951
chr17 46089867 46089887 RREB1 JASPAR yes 21249396
chr17 46089867 46089887 RREB1 JASPAR yes 54552952
chr17 46089867 46089888 ZNF263 JASPAR yes 21249397
chr17 46089867 46089888 ZNF263 JASPAR yes 54552953
chr17 46089868 46089889 ZNF263 JASPAR yes 21249398
chr17 46089868 46089889 ZNF263 JASPAR yes 54552954
chr17 46089869 46089879 MZF1 JASPAR yes 21249399
chr17 46089869 46089879 MZF1 JASPAR yes 54552955
chr17 46089869 46089884 NR2C2 JASPAR yes 21249400
chr17 46089869 46089884 NR2C2 JASPAR yes 54552956
chr17 46089869 46089890 ZNF263 JASPAR yes 21249401
chr17 46089869 46089890 ZNF263 JASPAR yes 54552957
chr17 46089870 46089880 SP1 JASPAR yes 21249402
chr17 46089870 46089880 SP1 JASPAR yes 54552958
chr17 46089871 46089881 SP1 JASPAR yes 21249403
chr17 46089871 46089881 SP1 JASPAR yes 54552959
chr17 46089871 46089892 ZNF263 JASPAR yes 21249404
chr17 46089871 46089892 ZNF263 JASPAR yes 54552960
chr17 46089872 46089878 SP1 TRANSFAC yes 21249405
chr17 46089872 46089878 SP1 TRANSFAC yes 54552961
chr17 46089872 46089882 SP1 JASPAR yes 21249406
chr17 46089872 46089882 SP1 JASPAR yes 54552962
chr17 46089872 46089893 ZNF263 JASPAR yes 21249407
chr17 46089872 46089893 ZNF263 JASPAR yes 54552963
chr17 46089873 46089883 SP1 JASPAR yes 21249408
chr17 46089873 46089883 SP1 JASPAR yes 54552964
chr17 46089876 46089886 MZF1 JASPAR yes 21249409
chr17 46089876 46089886 MZF1 JASPAR yes 54552965
chr17 46089877 46089887 SP1 JASPAR yes 21249410
chr17 46089877 46089887 SP1 JASPAR yes 54552966
chr17 46089879 46089885 SP1 TRANSFAC yes 21249411
chr17 46089879 46089885 SP1 TRANSFAC yes 54552967
chr17 46089879 46089889 SP1 JASPAR yes 21249412
chr17 46089879 46089889 SP1 JASPAR yes 54552968
chr17 46089880 46089891 E2F6 JASPAR yes 21249413
chr17 46089880 46089891 E2F6 JASPAR yes 54552969
chr17 46089891 46089896 SP1 TRANSFAC yes 21249414
chr17 46089891 46089896 SP1 TRANSFAC yes 54552970
SNP sites on vista25006[chr17:46089554-46089940]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 46089556 rs145362694 G A no 4907398
chr17 46089655 rs575977397 G GCCGCGC
NHLH1
4907399
chr17 46089813 rs35662223 T C no 4907400
chr17 46089875 rs56116380 C G
MZF1 NR2C2 RREB1 SP1 ZNF263
4907401
Genes possibly regulated by vista25006[chr17:46089554-46089940]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 46018872 46025654 + PNPO ENSG00000108439.5 46018872 0.82 0.99 15982 29318
chr17 46029333 46035244 - PRR15L ENSG00000167183.2 46035244 0.86 0.98 15983 45690
chr17 46045176 46059140 + CDK5RAP3 ENSG00000108465.10 46045176 0.76 1.0 15984 55622
chr17 46103533 46115392 - COPZ2 ENSG00000005243.5 46115392 0.68 0.88 15985 74548
chr17 46125691 46138849 + NFE2L1 ENSG00000082641.11 46125691 0.7 1.0 15986 64249
chr17 46147414 46178883 - CBX1 ENSG00000108468.10 46178883 0.73 0.99 15987 11057
chr17 46180719 46200436 + SNX11 ENSG00000002919.10 46180719 0.63 1.0 15988 9221
Expression level of Genes
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miRNAs possibly regulated by vista25006[chr17:46089554-46089940]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results