EnhancerDB
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  3. rs56116380[chr17:46089875]
Enhancers that have rs56116380[chr17:46089875]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 46086719 46098055 enh4449
Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Ovary Bone (Osteoblast) Blood (GM12878) Muscle (A673) Peripheral Blood (MM.1S) Blood (Karpas-422) Spleen Stomach
chr17 46089554 46089940 vista25006
VISTA
Transcript factors that have rs56116380[chr17:46089875]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 46089449 46089985 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21767406
chr17 46089449 46089985 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108267750
chr17 46089535 46089899 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21767407
chr17 46089535 46089899 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108267751
chr17 46089542 46089978 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21767408
chr17 46089542 46089978 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108267752
chr17 46089564 46090000 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21767409
chr17 46089564 46090000 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108267753
chr17 46089567 46089967 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108267754
chr17 46089590 46089960 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108267756
chr17 46089592 46089888 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 21767411
chr17 46089592 46089888 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 108267757
chr17 46089592 46089936 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108267758
chr17 46089610 46089940 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108267760
chr17 46089616 46089940 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108267761
chr17 46089622 46089946 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108267762
chr17 46089646 46089956 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108267763
chr17 46089861 46089882 ZNF263 JASPAR yes 21249388
chr17 46089861 46089882 ZNF263 JASPAR yes 54552944
chr17 46089864 46089879 NR2C2 JASPAR yes 21249389
chr17 46089864 46089879 NR2C2 JASPAR yes 54552945
chr17 46089864 46089885 ZNF263 JASPAR yes 21249390
chr17 46089864 46089885 ZNF263 JASPAR yes 54552946
chr17 46089865 46089875 SP1 JASPAR yes 21249392
chr17 46089865 46089875 SP1 JASPAR yes 54552948
chr17 46089865 46089886 ZNF263 JASPAR yes 21249393
chr17 46089865 46089886 ZNF263 JASPAR yes 54552949
chr17 46089866 46089876 SP1 JASPAR yes 21249394
chr17 46089866 46089876 SP1 JASPAR yes 54552950
chr17 46089866 46089887 ZNF263 JASPAR yes 21249395
chr17 46089866 46089887 ZNF263 JASPAR yes 54552951
chr17 46089867 46089887 RREB1 JASPAR yes 21249396
chr17 46089867 46089887 RREB1 JASPAR yes 54552952
chr17 46089867 46089888 ZNF263 JASPAR yes 21249397
chr17 46089867 46089888 ZNF263 JASPAR yes 54552953
chr17 46089868 46089889 ZNF263 JASPAR yes 21249398
chr17 46089868 46089889 ZNF263 JASPAR yes 54552954
chr17 46089869 46089879 MZF1 JASPAR yes 21249399
chr17 46089869 46089879 MZF1 JASPAR yes 54552955
chr17 46089869 46089884 NR2C2 JASPAR yes 21249400
chr17 46089869 46089884 NR2C2 JASPAR yes 54552956
chr17 46089869 46089890 ZNF263 JASPAR yes 21249401
chr17 46089869 46089890 ZNF263 JASPAR yes 54552957
chr17 46089870 46089880 SP1 JASPAR yes 21249402
chr17 46089870 46089880 SP1 JASPAR yes 54552958
chr17 46089871 46089881 SP1 JASPAR yes 21249403
chr17 46089871 46089881 SP1 JASPAR yes 54552959
chr17 46089871 46089892 ZNF263 JASPAR yes 21249404
chr17 46089871 46089892 ZNF263 JASPAR yes 54552960
chr17 46089872 46089878 SP1 TRANSFAC yes 21249405
chr17 46089872 46089878 SP1 TRANSFAC yes 54552961
chr17 46089872 46089882 SP1 JASPAR yes 21249406
chr17 46089872 46089882 SP1 JASPAR yes 54552962
chr17 46089872 46089893 ZNF263 JASPAR yes 21249407
chr17 46089872 46089893 ZNF263 JASPAR yes 54552963
chr17 46089873 46089883 SP1 JASPAR yes 21249408
chr17 46089873 46089883 SP1 JASPAR yes 54552964
Genes associated with rs56116380[chr17:46089875], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More