EnhancerDB
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  3. vista25012[chr17:46205987-46206223]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25012[chr17:46205987-46206223]
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Tissue distribution of vista25012
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Transcription factor that possibly regulate vista25012[chr17:46205987-46206223]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 46206027 46206036 SRY JASPAR yes 21249614
chr17 46206027 46206036 SRY JASPAR yes 54561406
chr17 46206029 46206032 MYB TRANSFAC yes 21249615
chr17 46206029 46206032 MYB TRANSFAC yes 54561407
chr17 46206054 46206059 GATA2 JASPAR yes 21249616
chr17 46206054 46206059 GATA2 JASPAR yes 54561408
chr17 46206075 46206080 SP1 TRANSFAC yes 21249617
chr17 46206075 46206080 SP1 TRANSFAC yes 54561409
chr17 46206088 46206098 SP1 JASPAR yes 21249618
chr17 46206088 46206098 SP1 JASPAR yes 54561410
chr17 46206090 46206096 MAZ TRANSFAC yes 21249619
chr17 46206090 46206096 MAZ TRANSFAC yes 54561411
chr17 46206092 46206113 IRF1 JASPAR yes 21249620
chr17 46206092 46206113 IRF1 JASPAR yes 54561412
chr17 46206093 46206114 IRF1 JASPAR yes 21249621
chr17 46206093 46206114 IRF1 JASPAR yes 54561413
chr17 46206096 46206111 IRF9 JASPAR yes 21249622
chr17 46206096 46206111 IRF9 JASPAR yes 54561414
chr17 46206097 46206109 IRF1 JASPAR yes 21249623
chr17 46206097 46206109 IRF1 JASPAR yes 54561415
chr17 46206098 46206119 IRF1 JASPAR yes 21249624
chr17 46206098 46206119 IRF1 JASPAR yes 54561416
chr17 46206099 46206105 TCF4 TRANSFAC yes 21249625
chr17 46206099 46206105 TCF4 TRANSFAC yes 54561417
chr17 46206099 46206114 FOXP1 JASPAR yes 21249626
chr17 46206099 46206114 MEF2C JASPAR yes 21249627
chr17 46206099 46206114 FOXP1 JASPAR yes 54561418
chr17 46206099 46206114 MEF2C JASPAR yes 54561419
chr17 46206099 46206120 IRF1 JASPAR yes 21249628
chr17 46206099 46206120 IRF1 JASPAR yes 54561420
chr17 46206100 46206111 FOXP2 JASPAR yes 21249629
chr17 46206100 46206111 FOXP2 JASPAR yes 54561421
chr17 46206100 46206112 FOXC2 JASPAR yes 21249630
chr17 46206100 46206112 FOXC2 JASPAR yes 54561422
chr17 46206100 46206115 STAT2 JASPAR yes 21249631
chr17 46206100 46206115 STAT2 JASPAR yes 54561423
chr17 46206101 46206116 FOXP1 JASPAR yes 21249632
chr17 46206101 46206116 FOXP1 JASPAR yes 54561424
chr17 46206103 46206115 IRF1 JASPAR yes 21249633
chr17 46206103 46206115 IRF1 JASPAR yes 54561425
chr17 46206103 46206117 IRF7 JASPAR yes 21249634
chr17 46206103 46206117 IRF7 JASPAR yes 54561426
chr17 46206104 46206119 MEF2A JASPAR yes 21249635
chr17 46206104 46206119 MEF2A JASPAR yes 54561427
chr17 46206104 46206125 IRF1 JASPAR yes 21249636
chr17 46206104 46206125 IRF1 JASPAR yes 54561428
chr17 46206105 46206120 MEF2C JASPAR yes 21249637
chr17 46206105 46206120 MEF2C JASPAR yes 54561429
chr17 46206105 46206126 IRF1 JASPAR yes 21249638
chr17 46206105 46206126 IRF1 JASPAR yes 54561430
chr17 46206108 46206112 YY1 TRANSFAC yes 21249639
chr17 46206108 46206112 YY1 TRANSFAC yes 54561431
chr17 46206109 46206121 IRF1 JASPAR yes 21249640
chr17 46206109 46206121 IRF1 JASPAR yes 54561432
chr17 46206109 46206123 IRF7 JASPAR yes 21249641
chr17 46206109 46206123 IRF7 JASPAR yes 54561433
chr17 46206109 46206124 IRF9 JASPAR yes 21249642
chr17 46206109 46206124 IRF9 JASPAR yes 54561434
chr17 46206110 46206131 IRF1 JASPAR yes 21249643
chr17 46206110 46206131 IRF1 JASPAR yes 54561435
chr17 46206111 46206117 TCF4 TRANSFAC yes 21249644
chr17 46206111 46206117 TCF4 TRANSFAC yes 54561436
chr17 46206111 46206126 FOXP1 JASPAR yes 21249645
chr17 46206111 46206126 FOXP1 JASPAR yes 54561437
chr17 46206115 46206127 IRF1 JASPAR yes 21249646
chr17 46206115 46206127 IRF1 JASPAR yes 54561438
chr17 46206117 46206123 TCF4 TRANSFAC yes 21249647
chr17 46206117 46206123 TCF4 TRANSFAC yes 54561439
chr17 46206125 46206131 NFIC JASPAR yes 21249648
chr17 46206125 46206131 NFIC JASPAR yes 54561440
chr17 46206129 46206143 TCF7L2 JASPAR yes 21249649
chr17 46206129 46206143 TCF7L2 JASPAR yes 54561441
chr17 46206129 46206144 LEF1 JASPAR yes 21249650
chr17 46206129 46206144 LEF1 JASPAR yes 54561442
chr17 46206133 46206139 TCF4 TRANSFAC yes 21249651
chr17 46206133 46206139 TCF4 TRANSFAC yes 54561443
chr17 46206145 46206149 NFE TRANSFAC yes 21249652
chr17 46206145 46206149 NFE TRANSFAC yes 54561444
chr17 46206165 46206171 TCF4 TRANSFAC yes 21249653
chr17 46206165 46206171 TCF4 TRANSFAC yes 54561445
chr17 46206176 46206191 FOXP1 JASPAR yes 21249654
chr17 46206176 46206191 FOXP1 JASPAR yes 54561446
chr17 46206176 46206197 IRF1 JASPAR yes 21249655
chr17 46206176 46206197 IRF1 JASPAR yes 54561447
chr17 46206177 46206192 FOXP1 JASPAR yes 21249656
chr17 46206177 46206192 FOXP1 JASPAR yes 54561448
chr17 46206177 46206198 IRF1 JASPAR yes 21249657
chr17 46206177 46206198 IRF1 JASPAR yes 54561449
chr17 46206178 46206184 TBP TRANSFAC yes 21249658
chr17 46206178 46206184 TBP TRANSFAC yes 54561450
chr17 46206178 46206193 FOXP1 JASPAR yes 21249659
chr17 46206178 46206193 FOXP1 JASPAR yes 54561451
chr17 46206180 46206195 FOXP1 JASPAR yes 21249660
chr17 46206180 46206195 FOXP1 JASPAR yes 54561452
chr17 46206181 46206196 STAT2 JASPAR yes 21249661
chr17 46206181 46206196 STAT2 JASPAR yes 54561453
chr17 46206182 46206197 FOXP1 JASPAR yes 21249662
chr17 46206182 46206197 FOXP1 JASPAR yes 54561454
chr17 46206182 46206203 IRF1 JASPAR yes 21249663
chr17 46206182 46206203 IRF1 JASPAR yes 54561455
chr17 46206184 46206196 FOXC2 JASPAR yes 21249664
chr17 46206184 46206196 FOXC2 JASPAR yes 54561456
chr17 46206184 46206204 RREB1 JASPAR yes 21249665
chr17 46206184 46206204 RREB1 JASPAR yes 54561457
chr17 46206185 46206196 FOXP2 JASPAR yes 21249666
chr17 46206185 46206196 FOXP2 JASPAR yes 54561458
chr17 46206186 46206201 STAT2 JASPAR yes 21249667
chr17 46206186 46206201 STAT2 JASPAR yes 54561459
chr17 46206187 46206199 IRF1 JASPAR yes 21249668
chr17 46206187 46206199 IRF1 JASPAR yes 54561460
chr17 46206187 46206202 FOXP1 JASPAR yes 21249669
chr17 46206187 46206202 FOXP1 JASPAR yes 54561461
chr17 46206194 46206200 HiNF-A TRANSFAC yes 21249670
chr17 46206194 46206200 HiNF-A TRANSFAC yes 54561462
chr17 46206201 46206222 IRF1 JASPAR yes 21249671
chr17 46206201 46206222 IRF1 JASPAR yes 54561463
chr17 46206202 46206208 LEF1 TRANSFAC yes 21249672
chr17 46206202 46206208 SOX10 JASPAR yes 21249673
chr17 46206202 46206208 LEF1 TRANSFAC yes 54561464
chr17 46206202 46206208 SOX10 JASPAR yes 54561465
chr17 46206203 46206218 STAT2 JASPAR yes 21249674
chr17 46206203 46206218 STAT2 JASPAR yes 54561466
chr17 46206204 46206218 STAT1 JASPAR yes 21249675
chr17 46206204 46206218 STAT1 JASPAR yes 54561467
chr17 46206205 46206220 IRF9 JASPAR yes 21249676
chr17 46206205 46206220 IRF9 JASPAR yes 54561468
chr17 46206205 46206226 IRF1 JASPAR yes 21249677
chr17 46206205 46206226 IRF1 JASPAR yes 54561469
chr17 46206206 46206221 FOXP1 JASPAR yes 21249678
chr17 46206206 46206221 FOXP1 JASPAR yes 54561470
chr17 46206206 46206227 IRF1 JASPAR yes 21249679
chr17 46206206 46206227 IRF1 JASPAR yes 54561471
chr17 46206207 46206222 STAT2 JASPAR yes 21249680
chr17 46206207 46206222 STAT2 JASPAR yes 54561472
chr17 46206211 46206232 ZNF263 JASPAR yes 21249681
chr17 46206211 46206232 ZNF263 JASPAR yes 54561473
chr17 46206212 46206227 FOXP1 JASPAR yes 21249682
chr17 46206212 46206227 FOXP1 JASPAR yes 54561474
chr17 46206213 46206228 LEF1 JASPAR yes 21249683
chr17 46206213 46206228 LEF1 JASPAR yes 54561475
chr17 46206214 46206228 TCF7L2 JASPAR yes 21249684
chr17 46206214 46206228 TCF7L2 JASPAR yes 54561476
chr17 46206214 46206235 ZNF263 JASPAR yes 21249685
chr17 46206214 46206235 ZNF263 JASPAR yes 54561477
SNP sites on vista25012[chr17:46205987-46206223]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 46205996 rs546125569 T A no 4908209
chr17 46206015 rs758999 C T no 4908210
chr17 46206188 rs528106515 A C
FOXC2 FOXP1 FOXP2 IRF1 RREB1 STAT2
4908211
chr17 46206192 rs5820684 AC A
FOXC2 FOXP1 FOXP2 IRF1 RREB1 STAT2
4908212
chr17 46206196 rs561598166 A C
FOXC2 FOXP1 FOXP2 HiNF-A IRF1 RREB1 STAT2
4908213
chr17 46206211 rs5820685 C CT
FOXP1 IRF1 IRF9 STAT1 STAT2 ZNF263
4908214
Genes possibly regulated by vista25012[chr17:46205987-46206223]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 46103533 46115392 - COPZ2 ENSG00000005243.5 46115392 0.68 0.88 15985 9405
chr17 46125691 46138849 + NFE2L1 ENSG00000082641.11 46125691 0.7 1.0 15986 19704
chr17 46147414 46178883 - CBX1 ENSG00000108468.10 46178883 0.73 0.99 15987 72896
chr17 46180719 46200436 + SNX11 ENSG00000002919.10 46180719 0.63 1.0 15988 74732
Expression level of Genes
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miRNAs possibly regulated by vista25012[chr17:46205987-46206223]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results