EnhancerDB
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  3. rs561598166[chr17:46206196]
Enhancers that have rs561598166[chr17:46206196]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 46201349 46209662 enh62622
Esophagus Colon (HCT116) Brain (SK-N-SH) Epithelial (MCF-7)
chr17 46205987 46206223 vista25012
VISTA
Transcript factors that have rs561598166[chr17:46206196]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 46206176 46206197 IRF1 JASPAR yes 21249655
chr17 46206176 46206197 IRF1 JASPAR yes 54561447
chr17 46206177 46206198 IRF1 JASPAR yes 21249657
chr17 46206177 46206198 IRF1 JASPAR yes 54561449
chr17 46206181 46206196 STAT2 JASPAR yes 21249661
chr17 46206181 46206196 STAT2 JASPAR yes 54561453
chr17 46206182 46206197 FOXP1 JASPAR yes 21249662
chr17 46206182 46206197 FOXP1 JASPAR yes 54561454
chr17 46206182 46206203 IRF1 JASPAR yes 21249663
chr17 46206182 46206203 IRF1 JASPAR yes 54561455
chr17 46206184 46206196 FOXC2 JASPAR yes 21249664
chr17 46206184 46206196 FOXC2 JASPAR yes 54561456
chr17 46206184 46206204 RREB1 JASPAR yes 21249665
chr17 46206184 46206204 RREB1 JASPAR yes 54561457
chr17 46206185 46206196 FOXP2 JASPAR yes 21249666
chr17 46206185 46206196 FOXP2 JASPAR yes 54561458
chr17 46206186 46206201 STAT2 JASPAR yes 21249667
chr17 46206186 46206201 STAT2 JASPAR yes 54561459
chr17 46206187 46206199 IRF1 JASPAR yes 21249668
chr17 46206187 46206199 IRF1 JASPAR yes 54561460
chr17 46206187 46206202 FOXP1 JASPAR yes 21249669
chr17 46206187 46206202 FOXP1 JASPAR yes 54561461
chr17 46206194 46206200 HiNF-A TRANSFAC yes 21249670
chr17 46206194 46206200 HiNF-A TRANSFAC yes 54561462
Genes associated with rs561598166[chr17:46206196], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More