EnhancerDB
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  3. vista25034[chr17:46648538-46649382]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25034[chr17:46648538-46649382]
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Tissue distribution of vista25034
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Transcription factor that possibly regulate vista25034[chr17:46648538-46649382]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 46648557 46648571 ONECUT1 JASPAR yes 21250592
chr17 46648557 46648571 ONECUT2 JASPAR yes 21250593
chr17 46648557 46648571 ONECUT3 JASPAR yes 21250594
chr17 46648558 46648569 DUX4 JASPAR yes 21250595
chr17 46648568 46648582 IRF8 JASPAR yes 21250596
chr17 46648580 46648587 E2F1 TRANSFAC yes 21250597
chr17 46648586 46648596 HOXA13 JASPAR yes 21250598
chr17 46648586 46648596 HOXB13 JASPAR yes 21250599
chr17 46648586 46648596 HOXD13 JASPAR yes 21250600
chr17 46648586 46648597 HOXA10 JASPAR yes 21250601
chr17 46648586 46648597 HOXD12 JASPAR yes 21250602
chr17 46648587 46648596 CDX1 JASPAR yes 21250603
chr17 46648587 46648598 CDX2 JASPAR yes 21250604
chr17 46648648 46648655 NFATC2 JASPAR yes 21250605
chr17 46648661 46648671 SP1 JASPAR yes 21250606
chr17 46648662 46648668 SP1 TRANSFAC yes 21250607
chr17 46648662 46648672 SP1 JASPAR yes 21250608
chr17 46648666 46648672 MZF1 JASPAR yes 21250609
chr17 46648667 46648679 NHLH1 JASPAR yes 21250610
chr17 46648668 46648678 NHLH1 JASPAR yes 21250611
chr17 46648707 46648712 SP1 TRANSFAC yes 21250612
chr17 46648736 46648749 NFKB1 JASPAR yes 21250613
chr17 46648737 46648741 LFA1 TRANSFAC yes 21250614
chr17 46648760 46648765 SP1 TRANSFAC yes 21250615
chr17 46648761 46648766 SP1 TRANSFAC yes 21250616
chr17 46648765 46648786 ZNF263 JASPAR yes 21250617
chr17 46648769 46648790 ZNF263 JASPAR yes 21250618
chr17 46648774 46648785 E2F6 JASPAR yes 21250619
chr17 46648776 46648797 ZNF263 JASPAR yes 21250620
chr17 46648785 46648790 TFAP2A TRANSFAC yes 21250621
chr17 46648785 46648791 MZF1 JASPAR yes 21250622
chr17 46648787 46648793 MAZ TRANSFAC yes 21250623
chr17 46648799 46648820 ZNF263 JASPAR yes 21250624
chr17 46648804 46648809 TFAP2A TRANSFAC yes 21250625
chr17 46648804 46648810 MZF1 JASPAR yes 21250626
chr17 46648804 46648825 ZNF263 JASPAR yes 21250627
chr17 46648807 46648828 ZNF263 JASPAR yes 21250628
chr17 46648811 46648826 PRDM1 JASPAR yes 21250629
chr17 46648812 46648823 E2F6 JASPAR yes 21250630
chr17 46648824 46648837 SCRT2 JASPAR yes 21250631
chr17 46648871 46648882 FLI1 JASPAR yes 21250632
chr17 46648872 46648877 ETS2 TRANSFAC yes 21250633
chr17 46648872 46648880 FEV JASPAR yes 21250634
chr17 46648891 46648905 SPI1 JASPAR yes 21250635
chr17 46648928 46648949 IRF1 JASPAR yes 21250636
chr17 46648946 46648958 ZBTB7B JASPAR yes 21250637
chr17 46648946 46648958 ZBTB7C JASPAR yes 21250638
chr17 46648949 46648954 SP1 TRANSFAC yes 21250639
chr17 46648956 46648965 PITX3 JASPAR yes 21250640
chr17 46648956 46648966 GSC2 JASPAR yes 21250641
chr17 46648956 46648966 GSC JASPAR yes 21250642
chr17 46648957 46648965 OTX2 JASPAR yes 21250643
chr17 46649002 46649020 ESR1 JASPAR yes 21250644
chr17 46649003 46649023 ESR1 JASPAR yes 21250645
chr17 46649007 46649013 SOX10 JASPAR yes 21250646
chr17 46649033 46649046 ZBTB18 JASPAR yes 21250647
chr17 46649039 46649053 TLX1 JASPAR yes 21250648
chr17 46649043 46649047 NFE TRANSFAC yes 21250649
chr17 46649043 46649048 GATA1 TRANSFAC yes 21250650
chr17 46649043 46649049 GATA3 JASPAR yes 21250651
chr17 46649047 46649056 THAP1 JASPAR yes 21250652
chr17 46649062 46649073 FOXH1 JASPAR yes 21250653
chr17 46649073 46649087 PLAG1 JASPAR yes 21250654
chr17 46649086 46649101 MEF2A JASPAR yes 21250655
chr17 46649087 46649102 MEF2C JASPAR yes 21250656
chr17 46649088 46649100 MEF2A JASPAR yes 21250657
chr17 46649088 46649100 MEF2B JASPAR yes 21250658
chr17 46649088 46649100 MEF2D JASPAR yes 21250659
chr17 46649089 46649099 MEF2A JASPAR yes 21250660
chr17 46649090 46649094 YY1 TRANSFAC yes 21250661
chr17 46649119 46649125 SOX10 JASPAR yes 21250662
chr17 46649134 46649138 NFE TRANSFAC yes 21250663
chr17 46649180 46649186 SOX10 JASPAR yes 21250664
chr17 46649209 46649213 YY1 TRANSFAC yes 21250665
chr17 46649222 46649228 GATA3 JASPAR yes 21250666
chr17 46649230 46649236 MZF1 JASPAR yes 21250667
chr17 46649248 46649261 POU3F3 JASPAR yes 21250668
chr17 46649259 46649279 RREB1 JASPAR yes 21250669
chr17 46649262 46649282 RREB1 JASPAR yes 21250670
chr17 46649270 46649285 RUNX2 JASPAR yes 21250671
chr17 46649279 46649284 GATA2 JASPAR yes 21250672
chr17 46649294 46649298 NFE TRANSFAC yes 21250673
chr17 46649310 46649313 MYB TRANSFAC yes 21250674
chr17 46649321 46649324 MYB TRANSFAC yes 21250675
chr17 46649324 46649328 YY1 TRANSFAC yes 21250676
chr17 46649347 46649351 NFE TRANSFAC yes 21250677
chr17 46649353 46649358 GATA1 TRANSFAC yes 21250678
chr17 46649354 46649375 IRF1 JASPAR yes 21250679
chr17 46649357 46649361 NFE TRANSFAC yes 21250680
chr17 46649358 46649379 ZNF263 JASPAR yes 21250681
chr17 46649360 46649381 IRF1 JASPAR yes 21250682
chr17 46649361 46649382 ZNF263 JASPAR yes 21250683
chr17 46649362 46649377 PRDM1 JASPAR yes 21250684
chr17 46649362 46649377 STAT2 JASPAR yes 21250685
chr17 46649363 46649377 STAT1 JASPAR yes 21250686
chr17 46649364 46649378 IRF7 JASPAR yes 21250687
chr17 46649364 46649378 IRF8 JASPAR yes 21250688
chr17 46649364 46649379 IRF9 JASPAR yes 21250689
SNP sites on vista25034[chr17:46648538-46649382]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 46648665 rs137914175 C T
SP1
4910706
chr17 46648679 rs34822124 G A,T
NHLH1
4910707
chr17 46648744 rs34490194 C T
NFKB1
4910708
chr17 46648794 rs567413069 G T
ZNF263
4910709
chr17 46648844 rs548722373 C T no 4910710
chr17 46648899 rs2555111 C T
SPI1
4910711
chr17 46648900 rs34932850 C T
SPI1
4910712
chr17 46648997 rs140894509 G A no 4910713
chr17 46649186 rs35598082 G C
SOX10
4910714
chr17 46649345 rs75265071 C T no 4910715
chr17 46649362 rs555149591 CTCTCTT C
IRF1 PRDM1 STAT2 ZNF263
4910716
chr17 46649378 rs71377377 C T
IRF1 IRF7 IRF8 IRF9 ZNF263
4910717
Genes possibly regulated by vista25034[chr17:46648538-46649382]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 46605888 46608359 - HOXB1 ENSG00000120094.6 46608359 0.98 1.0 15990 59821
chr17 46618256 46623441 - HOXB2 ENSG00000173917.9 46623441 0.8 0.98 15991 74903
chr17 46626232 46682274 - HOXB3 ENSG00000120093.7 46682274 0.96 1.0 15992 67108
chr17 46652875 46657473 - HOXB4 ENSG00000182742.5 46657473 0.87 0.99 15993 91909
chr17 46668619 46671323 - HOXB5 ENSG00000120075.5 46671323 0.95 1.0 15994 78059
chr17 46671639 46682354 - HOXB6 ENSG00000108511.8 46682354 0.99 1.0 15995 67028
chr17 46684594 46710934 - HOXB7 ENSG00000260027.3 46710934 0.95 1.0 15996 38448
chr17 46688739 46692478 - HOXB8 ENSG00000120068.5 46692478 0.99 1.0 15997 56904
chr17 46698518 46703839 - HOXB9 ENSG00000170689.8 46703839 0.99 1.0 15998 45543
Expression level of Genes
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miRNAs possibly regulated by vista25034[chr17:46648538-46649382]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results