EnhancerDB
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  3. rs34490194[chr17:46648744]
Enhancers that have rs34490194[chr17:46648744]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 46648538 46649382 vista25034
VISTA
Transcript factors that have rs34490194[chr17:46648744]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 46647433 46649110 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108268325
chr17 46647433 46649110 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108268326
chr17 46648066 46648856 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108268333
chr17 46648273 46648869 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108268334
chr17 46648389 46648829 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108268335
chr17 46648438 46649038 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108268337
chr17 46648463 46648787 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108268338
chr17 46648515 46649131 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108268339
chr17 46648736 46648749 NFKB1 JASPAR yes 21250613
Genes associated with rs34490194[chr17:46648744], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 46618256 46623441 - HOXB2 ENSG00000173917.9 46623441 25303 Esophagus 8.5697e-05 15991