EnhancerDB
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  3. vista25067[chr17:47468290-47468719]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25067[chr17:47468290-47468719]
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Tissue distribution of vista25067
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Transcription factor that possibly regulate vista25067[chr17:47468290-47468719]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 47468487 47468773 NR3C1 UCSC Txn Factor no Conserved 108269369
chr17 47468289 47468303 SPIC JASPAR yes 21252066
chr17 47468289 47468303 SPIC JASPAR yes 54634303
chr17 47468290 47468311 ZNF263 JASPAR yes 21252067
chr17 47468290 47468311 ZNF263 JASPAR yes 54634304
chr17 47468317 47468323 MZF1 JASPAR yes 21252068
chr17 47468317 47468323 MZF1 JASPAR yes 54634305
chr17 47468322 47468332 RORA JASPAR yes 21252069
chr17 47468322 47468332 RORA JASPAR yes 54634306
chr17 47468323 47468336 NR2F1 JASPAR yes 21252070
chr17 47468323 47468336 NR2F1 JASPAR yes 54634307
chr17 47468324 47468339 LEF1 JASPAR yes 21252071
chr17 47468324 47468339 LEF1 JASPAR yes 54634308
chr17 47468327 47468331 ESR1 TRANSFAC yes 21252072
chr17 47468327 47468331 ESR1 TRANSFAC yes 54634309
chr17 47468361 47468365 LFA1 TRANSFAC yes 21252073
chr17 47468361 47468365 LFA1 TRANSFAC yes 54634310
chr17 47468372 47468377 SP1 TRANSFAC yes 21252074
chr17 47468372 47468377 SP1 TRANSFAC yes 54634311
chr17 47468384 47468394 RELA JASPAR yes 21252075
chr17 47468384 47468394 RELA JASPAR yes 54634312
chr17 47468385 47468400 PRDM1 JASPAR yes 21252076
chr17 47468385 47468400 STAT2 JASPAR yes 21252077
chr17 47468385 47468400 PRDM1 JASPAR yes 54634313
chr17 47468385 47468400 STAT2 JASPAR yes 54634314
chr17 47468385 47468402 RXRA JASPAR yes 21252078
chr17 47468385 47468402 RXRA JASPAR yes 54634315
chr17 47468397 47468411 NR2F1 JASPAR yes 21252079
chr17 47468397 47468411 NR2F1 JASPAR yes 54634316
chr17 47468409 47468413 YY1 TRANSFAC yes 21252080
chr17 47468409 47468413 YY1 TRANSFAC yes 54634317
chr17 47468410 47468418 FEV JASPAR yes 21252081
chr17 47468410 47468418 FEV JASPAR yes 54634318
chr17 47468425 47468429 LFA1 TRANSFAC yes 21252082
chr17 47468425 47468429 LFA1 TRANSFAC yes 54634319
chr17 47468437 47468442 SP1 TRANSFAC yes 21252083
chr17 47468437 47468442 SP1 TRANSFAC yes 54634320
chr17 47468450 47468464 MTF1 JASPAR yes 21252084
chr17 47468450 47468464 MTF1 JASPAR yes 54634321
chr17 47468456 47468471 MEF2C JASPAR yes 21252085
chr17 47468456 47468471 MEF2C JASPAR yes 54634322
chr17 47468489 47468504 STAT2 JASPAR yes 21252086
chr17 47468489 47468504 STAT2 JASPAR yes 54634323
chr17 47468491 47468503 IRF1 JASPAR yes 21252087
chr17 47468491 47468503 IRF1 JASPAR yes 54634324
chr17 47468493 47468499 TCF4 TRANSFAC yes 21252088
chr17 47468493 47468499 TCF4 TRANSFAC yes 54634325
chr17 47468496 47468504 FOXO3 JASPAR yes 21252089
chr17 47468496 47468504 FOXO3 JASPAR yes 54634326
chr17 47468515 47468527 PKNOX1 JASPAR yes 21252090
chr17 47468515 47468527 PKNOX2 JASPAR yes 21252091
chr17 47468515 47468527 TGIF1 JASPAR yes 21252092
chr17 47468515 47468527 TGIF2 JASPAR yes 21252093
chr17 47468515 47468527 PKNOX1 JASPAR yes 54634327
chr17 47468515 47468527 PKNOX2 JASPAR yes 54634328
chr17 47468515 47468527 TGIF1 JASPAR yes 54634329
chr17 47468515 47468527 TGIF2 JASPAR yes 54634330
chr17 47468538 47468549 USF2 JASPAR yes 21252094
chr17 47468538 47468549 USF2 JASPAR yes 54634331
chr17 47468545 47468560 FOXP1 JASPAR yes 21252095
chr17 47468545 47468560 FOXP1 JASPAR yes 54634332
chr17 47468549 47468557 FOXO3 JASPAR yes 21252096
chr17 47468549 47468557 FOXO3 JASPAR yes 54634333
chr17 47468550 47468559 SRY JASPAR yes 21252097
chr17 47468550 47468559 SRY JASPAR yes 54634334
chr17 47468556 47468567 DMRT3 JASPAR yes 21252098
chr17 47468556 47468567 DMRT3 JASPAR yes 54634335
chr17 47468564 47468568 YY1 TRANSFAC yes 21252099
chr17 47468564 47468568 YY1 TRANSFAC yes 54634336
chr17 47468580 47468586 ZNF354C JASPAR yes 21252100
chr17 47468580 47468586 ZNF354C JASPAR yes 54634337
chr17 47468580 47468590 GSC2 JASPAR yes 21252101
chr17 47468580 47468590 GSC JASPAR yes 21252102
chr17 47468580 47468590 GSC2 JASPAR yes 54634338
chr17 47468580 47468590 GSC JASPAR yes 54634339
chr17 47468581 47468590 PITX3 JASPAR yes 21252103
chr17 47468581 47468590 PITX3 JASPAR yes 54634340
chr17 47468600 47468604 LFA1 TRANSFAC yes 21252104
chr17 47468600 47468604 LFA1 TRANSFAC yes 54634341
chr17 47468617 47468635 SRF JASPAR yes 21252105
chr17 47468617 47468635 SRF JASPAR yes 54634342
chr17 47468625 47468640 FOXP1 JASPAR yes 21252106
chr17 47468625 47468640 FOXP1 JASPAR yes 54634343
chr17 47468626 47468637 FOXA1 JASPAR yes 21252107
chr17 47468626 47468637 FOXA1 JASPAR yes 54634344
chr17 47468627 47468638 FOXC1 JASPAR yes 21252108
chr17 47468627 47468638 FOXC1 JASPAR yes 54634345
chr17 47468627 47468639 FOXC2 JASPAR yes 21252109
chr17 47468627 47468639 FOXC2 JASPAR yes 54634346
chr17 47468628 47468639 FOXP2 JASPAR yes 21252110
chr17 47468628 47468639 FOXP2 JASPAR yes 54634347
chr17 47468629 47468637 FOXO3 JASPAR yes 21252111
chr17 47468629 47468637 FOXO3 JASPAR yes 54634348
chr17 47468647 47468664 NR3C1 JASPAR yes 21252112
chr17 47468647 47468664 NR3C2 JASPAR yes 21252113
chr17 47468647 47468664 NR3C1 JASPAR yes 54634349
chr17 47468647 47468664 NR3C2 JASPAR yes 54634350
chr17 47468647 47468665 NR3C1 JASPAR yes 21252114
chr17 47468647 47468665 NR3C1 JASPAR yes 54634351
chr17 47468665 47468673 NR4A2 JASPAR yes 21252115
chr17 47468665 47468673 NR4A2 JASPAR yes 54634352
chr17 47468672 47468686 POU1F1 JASPAR yes 21252116
chr17 47468672 47468686 POU1F1 JASPAR yes 54634353
chr17 47468673 47468685 POU3F2 JASPAR yes 21252117
chr17 47468673 47468685 POU3F2 JASPAR yes 54634354
chr17 47468673 47468688 FOXA1 JASPAR yes 21252118
chr17 47468673 47468688 FOXA1 JASPAR yes 54634355
chr17 47468674 47468686 FOXC2 JASPAR yes 21252119
chr17 47468674 47468686 FOXC2 JASPAR yes 54634356
chr17 47468680 47468690 MEOX2 JASPAR yes 21252120
chr17 47468680 47468690 MEOX2 JASPAR yes 54634357
chr17 47468697 47468715 NR3C1 JASPAR yes 21252121
chr17 47468697 47468715 NR3C1 JASPAR yes 54634358
chr17 47468698 47468703 GATA2 JASPAR yes 21252122
chr17 47468698 47468703 GATA2 JASPAR yes 54634359
chr17 47468698 47468718 TP63 JASPAR yes 21252123
chr17 47468698 47468718 TP63 JASPAR yes 54634360
chr17 47468701 47468708 NKX3-1 JASPAR yes 21252124
chr17 47468701 47468708 NKX3-1 JASPAR yes 54634361
SNP sites on vista25067[chr17:47468290-47468719]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 47468456 rs539561550 G A
MEF2C MTF1
4915575
chr17 47468546 rs57030023 T A
FOXP1 NR3C1 USF2
4915576
chr17 47468639 rs186601870 G A
FOXC2 FOXP1 FOXP2 NR3C1
4915577
chr17 47468706 rs16948071 T G
NKX3-1 NR3C1 TP63
4915578
chr17 47468708 rs76904000 T C
NKX3-1 NR3C1 TP63
4915579
Genes possibly regulated by vista25067[chr17:47468290-47468719]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 47366568 47439835 - ZNF652 ENSG00000198740.4 47439835 0.69 1.0 16012 71545
chr17 47448102 47554350 + RP11-81K2.1 ENSG00000262039.1 47448102 0.88 1.0 16013 79812
chr17 47481414 47492246 - PHB ENSG00000167085.7 47492246 0.72 1.0 16014 76473
Expression level of Genes
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miRNAs possibly regulated by vista25067[chr17:47468290-47468719]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results