EnhancerDB
  1. Home
  2. SNP
  3. rs539561550[chr17:47468456]
Enhancers that have rs539561550[chr17:47468456]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 47462845 47474615 enh4461
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Blood (T-cell) Esophagus Blood (GM12878) Stomach Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Spleen Thymus Heart
chr17 47468290 47468719 vista25067
VISTA
Transcript factors that have rs539561550[chr17:47468456]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 47467965 47468515 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21768694
chr17 47467965 47468515 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108269350
chr17 47467965 47468515 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108269351
chr17 47468122 47468532 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21768700
chr17 47468122 47468532 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108269365
chr17 47468122 47468532 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108269366
chr17 47468159 47468529 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21768701
chr17 47468159 47468529 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108269367
chr17 47468450 47468464 MTF1 JASPAR yes 21252084
chr17 47468450 47468464 MTF1 JASPAR yes 54634321
chr17 47468456 47468471 MEF2C JASPAR yes 21252085
chr17 47468456 47468471 MEF2C JASPAR yes 54634322
Genes associated with rs539561550[chr17:47468456], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More