EnhancerDB
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  3. vista25084[chr17:47942337-47942718]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25084[chr17:47942337-47942718]
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Tissue distribution of vista25084
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Transcription factor that possibly regulate vista25084[chr17:47942337-47942718]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 47942377 47942397 RREB1 JASPAR yes 21252855
chr17 47942378 47942386 NR4A2 JASPAR yes 21252856
chr17 47942392 47942403 FOXB1 JASPAR yes 21252857
chr17 47942394 47942404 EVX1 JASPAR yes 21252858
chr17 47942394 47942404 MEOX1 JASPAR yes 21252859
chr17 47942394 47942404 MEOX2 JASPAR yes 21252860
chr17 47942400 47942405 GATA2 JASPAR yes 21252861
chr17 47942402 47942408 MZF1 JASPAR yes 21252862
chr17 47942423 47942436 SMAD2 JASPAR yes 21252863
chr17 47942434 47942448 FOXF2 JASPAR yes 21252864
chr17 47942434 47942449 FOXP1 JASPAR yes 21252865
chr17 47942435 47942446 FOXA1 JASPAR yes 21252866
chr17 47942435 47942450 FOXA1 JASPAR yes 21252867
chr17 47942436 47942442 JUN TRANSFAC yes 21252868
chr17 47942436 47942447 FOXB1 JASPAR yes 21252869
chr17 47942436 47942447 FOXC1 JASPAR yes 21252870
chr17 47942436 47942448 FOXC2 JASPAR yes 21252871
chr17 47942437 47942448 FOXP2 JASPAR yes 21252872
chr17 47942439 47942446 FOXD2 JASPAR yes 21252873
chr17 47942439 47942446 FOXI1 JASPAR yes 21252874
chr17 47942439 47942446 FOXL1 JASPAR yes 21252875
chr17 47942439 47942446 FOXO4 JASPAR yes 21252876
chr17 47942439 47942446 FOXO6 JASPAR yes 21252877
chr17 47942439 47942446 FOXP3 JASPAR yes 21252878
chr17 47942439 47942447 FOXD1 JASPAR yes 21252879
chr17 47942439 47942447 FOXG1 JASPAR yes 21252880
chr17 47942439 47942447 FOXO3 JASPAR yes 21252881
chr17 47942441 47942447 HiNF-A TRANSFAC yes 21252882
chr17 47942441 47942451 MAX JASPAR yes 21252883
chr17 47942451 47942457 ZNF354C JASPAR yes 21252884
chr17 47942472 47942479 JUN TRANSFAC yes 21252885
chr17 47942479 47942499 RREB1 JASPAR yes 21252886
chr17 47942508 47942515 USF1 JASPAR yes 21252887
chr17 47942509 47942514 MYC TRANSFAC yes 21252888
chr17 47942509 47942514 USF1 TRANSFAC yes 21252889
chr17 47942509 47942514 USF2 TRANSFAC yes 21252890
chr17 47942510 47942518 MGA JASPAR yes 21252891
chr17 47942510 47942518 TBX1 JASPAR yes 21252892
chr17 47942540 47942550 TBR1 JASPAR yes 21252893
chr17 47942548 47942566 TP53 JASPAR yes 21252894
chr17 47942561 47942565 NFE TRANSFAC yes 21252895
chr17 47942585 47942599 ZIC1 JASPAR yes 21252896
chr17 47942585 47942600 ZIC3 JASPAR yes 21252897
chr17 47942585 47942600 ZIC4 JASPAR yes 21252898
chr17 47942603 47942617 TLX1 JASPAR yes 21252899
chr17 47942612 47942629 RARA JASPAR yes 21252900
chr17 47942613 47942624 ELK4 JASPAR yes 21252901
chr17 47942614 47942624 GABPA JASPAR yes 21252902
chr17 47942614 47942626 ELF4 JASPAR yes 21252903
chr17 47942616 47942622 ETS1 JASPAR yes 21252904
chr17 47942616 47942622 SPI1 JASPAR yes 21252905
chr17 47942620 47942631 NFKB1 JASPAR yes 21252906
chr17 47942626 47942646 RREB1 JASPAR yes 21252907
chr17 47942627 47942647 RREB1 JASPAR yes 21252908
chr17 47942630 47942644 PLAG1 JASPAR yes 21252909
chr17 47942636 47942651 RUNX2 JASPAR yes 21252910
chr17 47942645 47942658 TFAP2A JASPAR yes 21252911
chr17 47942645 47942658 TFAP2C JASPAR yes 21252912
chr17 47942653 47942668 TFAP2A JASPAR yes 21252913
chr17 47942653 47942668 TFAP2C JASPAR yes 21252914
chr17 47942654 47942665 TFAP2A JASPAR yes 21252915
chr17 47942654 47942665 TFAP2B JASPAR yes 21252916
chr17 47942659 47942667 SP1 TRANSFAC yes 21252917
chr17 47942661 47942667 MAZ TRANSFAC yes 21252918
chr17 47942661 47942672 E2F6 JASPAR yes 21252919
chr17 47942668 47942684 SOX8 JASPAR yes 21252920
chr17 47942689 47942693 NFE TRANSFAC yes 21252921
chr17 47942689 47942702 SMAD2 JASPAR yes 21252922
chr17 47942699 47942708 PITX3 JASPAR yes 21252923
chr17 47942699 47942709 GSC2 JASPAR yes 21252924
chr17 47942699 47942709 GSC JASPAR yes 21252925
chr17 47942700 47942708 OTX2 JASPAR yes 21252926
SNP sites on vista25084[chr17:47942337-47942718]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 47942339 rs116606007 A G no 4918304
chr17 47942375 rs8079058 G A no 4918305
chr17 47942408 rs8080832 A C
MZF1
4918306
chr17 47942452 rs571803648 G A,C
ZNF354C
4918307
chr17 47942479 rs200845808 CTG C
JUN RREB1
4918308
chr17 47942479 rs796248941 CTG C
JUN RREB1
4918309
chr17 47942489 rs534520500 G A,C
RREB1
4918310
chr17 47942500 rs567257616 C T no 4918311
chr17 47942540 rs111302562 G A,C
TBR1
4918312
chr17 47942609 rs73337067 C G,T
TLX1
4918313
chr17 47942621 rs150655927 C T
ELF4 ELK4 ETS1 GABPA NFKB1 RARA SPI1
4918314
chr17 47942672 rs140098580 C T
E2F6 SOX8
4918315
chr17 47942716 rs80022061 C G no 4918316
Genes possibly regulated by vista25084[chr17:47942337-47942718]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 47787694 47866542 - FAM117A ENSG00000121104.3 47866542 0.69 1.0 16019 24205
chr17 47865917 47906458 + KAT7 ENSG00000136504.7 47865917 0.59 1.0 16020 23580
chr17 47915671 47925379 - TAC4 ENSG00000176358.11 47925379 0.71 1.0 16021 83042
Expression level of Genes
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miRNAs possibly regulated by vista25084[chr17:47942337-47942718]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results