EnhancerDB
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  3. rs140098580[chr17:47942672]
Enhancers that have rs140098580[chr17:47942672]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 47942337 47942718 vista25084
VISTA
Transcript factors that have rs140098580[chr17:47942672]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 47939858 47942712 ZNF143 GTRD no Epithelial (MCF-7) 108269790
chr17 47939858 47942712 ZNF143 GTRD no Epithelial (MCF-7) 108269791
chr17 47940467 47942791 TCF7L2 GTRD no Colon (HCT116) 108269797
chr17 47940467 47942791 TCF7L2 GTRD no Colon (HCT116) 108269798
chr17 47940574 47942712 TCF7L2 GTRD no Colon (HCT116) 108269804
chr17 47940574 47942712 TCF7L2 GTRD no Colon (HCT116) 108269805
chr17 47940657 47942852 ZBTB33 GTRD no Lung (A549) 108269808
chr17 47940657 47942852 ZBTB33 GTRD no Lung (A549) 108269809
chr17 47940660 47943460 ZNF274 GTRD no Blood (GM12878) 108269810
chr17 47940660 47943460 ZNF274 GTRD no Blood (GM12878) 108269811
chr17 47940660 47943460 ZNF274 GTRD no Blood (GM12878) 108269812
chr17 47940665 47942782 ZNF274 GTRD no Bone Marrow (K562) 108269813
chr17 47940665 47942782 ZNF274 GTRD no Bone Marrow (K562) 108269814
chr17 47940711 47942852 ZNF274 GTRD no Blood (GM12878) 108269815
chr17 47940711 47942852 ZNF274 GTRD no Blood (GM12878) 108269816
chr17 47940711 47943067 ZNF274 GTRD no Liver (HepG2) 108269817
chr17 47940711 47943067 ZNF274 GTRD no Liver (HepG2) 108269818
chr17 47940744 47943001 ZBTB33 GTRD no Lung (A549) 108269821
chr17 47940744 47943001 ZBTB33 GTRD no Lung (A549) 108269822
chr17 47940750 47942794 ZBTB33 GTRD no Lung (A549) 108269827
chr17 47940750 47942794 ZBTB33 GTRD no Lung (A549) 108269828
chr17 47940759 47943039 ZNF274 GTRD no Liver (HepG2) 108269829
chr17 47940759 47943039 ZNF274 GTRD no Liver (HepG2) 108269830
chr17 47940761 47942766 ZBTB33 GTRD no Lung (A549) 108269833
chr17 47940761 47942766 ZBTB33 GTRD no Lung (A549) 108269834
chr17 47940762 47943290 ZNF274 GTRD no Bone Marrow (K562) 108269835
chr17 47940762 47943290 ZNF274 GTRD no Bone Marrow (K562) 108269836
chr17 47940762 47943290 ZNF274 GTRD no Bone Marrow (K562) 108269837
chr17 47940765 47942821 ZBTB33 GTRD no Lung (A549) 108269840
chr17 47940765 47942821 ZBTB33 GTRD no Lung (A549) 108269841
chr17 47940766 47942887 ZNF274 GTRD no Liver (HepG2) 108269842
chr17 47940766 47942887 ZNF274 GTRD no Liver (HepG2) 108269843
chr17 47940769 47942760 ZNF274 GTRD no Bone Marrow (K562) 108269847
chr17 47940769 47942760 ZNF274 GTRD no Bone Marrow (K562) 108269848
chr17 47940772 47942861 ZNF143 GTRD no Epithelial (MCF-7) 108269850
chr17 47940772 47942861 ZNF143 GTRD no Epithelial (MCF-7) 108269851
chr17 47940777 47942903 ZNF274 GTRD no Liver (HepG2) 108269858
chr17 47940777 47942903 ZNF274 GTRD no Liver (HepG2) 108269859
chr17 47940779 47942804 ZNF274 GTRD no Blood (GM12878) 108269865
chr17 47940779 47942804 ZNF274 GTRD no Blood (GM12878) 108269866
chr17 47940779 47942854 ZBTB33 GTRD no Lung (A549) 108269867
chr17 47940779 47942854 ZBTB33 GTRD no Lung (A549) 108269868
chr17 47940779 47943051 ZNF274 GTRD no Liver (HepG2) 108269869
chr17 47940779 47943051 ZNF274 GTRD no Liver (HepG2) 108269870
chr17 47940784 47942834 ZNF274 GTRD no Liver (HepG2) 108269872
chr17 47940784 47942834 ZNF274 GTRD no Liver (HepG2) 108269873
chr17 47940787 47943228 ZNF274 GTRD no Liver (HepG2) 108269875
chr17 47940787 47943228 ZNF274 GTRD no Liver (HepG2) 108269876
chr17 47940787 47943228 ZNF274 GTRD no Liver (HepG2) 108269877
chr17 47940796 47942841 ZBTB33 GTRD no Lung (A549) 108269883
chr17 47940796 47942841 ZBTB33 GTRD no Lung (A549) 108269884
chr17 47940799 47942903 ZNF274 GTRD no Liver (HepG2) 108269885
chr17 47940799 47942903 ZNF274 GTRD no Liver (HepG2) 108269886
chr17 47940819 47942954 ZNF143 GTRD no Epithelial (MCF-7) 108269896
chr17 47940819 47942954 ZNF143 GTRD no Epithelial (MCF-7) 108269897
chr17 47940828 47942853 ZNF274 GTRD no Blood (GM12878) 108269902
chr17 47940828 47942853 ZNF274 GTRD no Blood (GM12878) 108269903
chr17 47940833 47942793 ZBTB33 GTRD no Lung (A549) 108269905
chr17 47940833 47942793 ZBTB33 GTRD no Lung (A549) 108269906
chr17 47940840 47942880 ZNF274 GTRD no Liver (HepG2) 108269909
chr17 47940840 47942880 ZNF274 GTRD no Liver (HepG2) 108269910
chr17 47940849 47943698 ZBTB33 GTRD no Lung (A549) 108269922
chr17 47940849 47943698 ZBTB33 GTRD no Lung (A549) 108269923
chr17 47940849 47943698 ZBTB33 GTRD no Lung (A549) 108269924
chr17 47940851 47942735 ZNF274 GTRD no Blood (GM12878) 108269927
chr17 47940851 47942735 ZNF274 GTRD no Blood (GM12878) 108269928
chr17 47940900 47942841 ZNF274 GTRD no Liver (HepG2) 108269967
chr17 47940900 47942841 ZNF274 GTRD no Liver (HepG2) 108269968
chr17 47940928 47942702 ZNF274 GTRD no Liver (HepG2) 108269974
chr17 47940928 47942702 ZNF274 GTRD no Liver (HepG2) 108269975
chr17 47941183 47942779 ZNF274 GTRD no Liver (HepG2) 108270085
chr17 47941183 47942779 ZNF274 GTRD no Liver (HepG2) 108270086
chr17 47942253 47943206 P63 GTRD no Skin (Keratinocyte) 108270127
chr17 47942253 47943206 P63 GTRD no Skin (Keratinocyte) 108270128
chr17 47942293 47943243 P63 GTRD no Skin (Keratinocyte) 108270129
chr17 47942293 47943243 P63 GTRD no Skin (Keratinocyte) 108270130
chr17 47942357 47943190 P63 GTRD no Skin (Keratinocyte) 108270131
chr17 47942458 47943269 P63 GTRD no Skin (Keratinocyte) 108270132
chr17 47942458 47943269 P63 GTRD no Skin (Keratinocyte) 108270133
chr17 47942661 47942672 E2F6 JASPAR yes 21252919
chr17 47942668 47942684 SOX8 JASPAR yes 21252920
Genes associated with rs140098580[chr17:47942672], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More