EnhancerDB
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  3. vista2513[chr1:94234014-94234407]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2513[chr1:94234014-94234407]
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Tissue distribution of vista2513
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Transcription factor that possibly regulate vista2513[chr1:94234014-94234407]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 94234100 94234510 GATA2 UCSC Txn Factor no Conserved 107815209
chr1 94234016 94234028 NHLH1 JASPAR yes 30833784
chr1 94234016 94234028 NHLH1 JASPAR yes 118331312
chr1 94234017 94234027 TFAP4 JASPAR yes 30833785
chr1 94234017 94234027 TFAP4 JASPAR yes 118331313
chr1 94234028 94234035 NFATC2 JASPAR yes 30833786
chr1 94234028 94234035 NFATC2 JASPAR yes 118331314
chr1 94234042 94234056 TLX1 JASPAR yes 30833787
chr1 94234042 94234056 TLX1 JASPAR yes 118331315
chr1 94234047 94234062 STAT1 JASPAR yes 30833788
chr1 94234047 94234062 STAT1 JASPAR yes 118331316
chr1 94234049 94234060 STAT1 JASPAR yes 30833789
chr1 94234049 94234060 STAT3 JASPAR yes 30833790
chr1 94234049 94234060 STAT1 JASPAR yes 118331317
chr1 94234049 94234060 STAT3 JASPAR yes 118331318
chr1 94234080 94234090 SP1 JASPAR yes 30833791
chr1 94234080 94234090 SP1 JASPAR yes 118331319
chr1 94234083 94234093 MZF1 JASPAR yes 30833792
chr1 94234083 94234093 MZF1 JASPAR yes 118331320
chr1 94234088 94234106 MAFF JASPAR yes 30833793
chr1 94234088 94234106 MAFF JASPAR yes 118331321
chr1 94234090 94234105 MAFK JASPAR yes 30833794
chr1 94234090 94234105 MAFK JASPAR yes 118331322
chr1 94234105 94234115 HMBOX1 JASPAR yes 30833795
chr1 94234105 94234115 HMBOX1 JASPAR yes 118331323
chr1 94234107 94234110 MYB TRANSFAC yes 30833796
chr1 94234107 94234110 MYB TRANSFAC yes 118331324
chr1 94234184 94234202 RARA JASPAR yes 30833797
chr1 94234184 94234202 RARA JASPAR yes 118331325
chr1 94234195 94234205 ALX3 JASPAR yes 30833798
chr1 94234195 94234205 GSX2 JASPAR yes 30833799
chr1 94234195 94234205 MIXL1 JASPAR yes 30833800
chr1 94234195 94234205 MNX1 JASPAR yes 30833801
chr1 94234195 94234205 ALX3 JASPAR yes 118331326
chr1 94234195 94234205 GSX2 JASPAR yes 118331327
chr1 94234195 94234205 MIXL1 JASPAR yes 118331328
chr1 94234195 94234205 MNX1 JASPAR yes 118331329
chr1 94234196 94234204 ISX JASPAR yes 30833802
chr1 94234196 94234204 LMX1A JASPAR yes 30833803
chr1 94234196 94234204 LMX1B JASPAR yes 30833804
chr1 94234196 94234204 NKX6-1 JASPAR yes 30833805
chr1 94234196 94234204 NKX6-2 JASPAR yes 30833806
chr1 94234196 94234204 PRRX1 JASPAR yes 30833807
chr1 94234196 94234204 RAX2 JASPAR yes 30833808
chr1 94234196 94234204 SHOX JASPAR yes 30833809
chr1 94234196 94234204 UNCX JASPAR yes 30833810
chr1 94234196 94234204 VAX1 JASPAR yes 30833811
chr1 94234196 94234204 ISX JASPAR yes 118331330
chr1 94234196 94234204 LMX1A JASPAR yes 118331331
chr1 94234196 94234204 LMX1B JASPAR yes 118331332
chr1 94234196 94234204 NKX6-1 JASPAR yes 118331333
chr1 94234196 94234204 NKX6-2 JASPAR yes 118331334
chr1 94234196 94234204 PRRX1 JASPAR yes 118331335
chr1 94234196 94234204 RAX2 JASPAR yes 118331336
chr1 94234196 94234204 SHOX JASPAR yes 118331337
chr1 94234196 94234204 UNCX JASPAR yes 118331338
chr1 94234196 94234204 VAX1 JASPAR yes 118331339
chr1 94234245 94234259 PLAG1 JASPAR yes 30833812
chr1 94234245 94234259 PLAG1 JASPAR yes 118331340
chr1 94234247 94234256 TFAP2A JASPAR yes 30833813
chr1 94234247 94234256 TFAP2A JASPAR yes 118331341
chr1 94234252 94234266 PLAG1 JASPAR yes 30833814
chr1 94234252 94234266 PLAG1 JASPAR yes 118331342
chr1 94234254 94234267 TFAP2A JASPAR yes 30833815
chr1 94234254 94234267 TFAP2A JASPAR yes 118331343
chr1 94234261 94234266 TFAP2A TRANSFAC yes 30833816
chr1 94234261 94234266 TFAP2A TRANSFAC yes 118331344
chr1 94234261 94234267 MZF1 JASPAR yes 30833817
chr1 94234261 94234267 MZF1 JASPAR yes 118331345
chr1 94234263 94234268 ETS2 TRANSFAC yes 30833818
chr1 94234263 94234268 ETS2 TRANSFAC yes 118331346
chr1 94234276 94234289 ELF1 JASPAR yes 30833819
chr1 94234276 94234289 ELF1 JASPAR yes 118331347
chr1 94234279 94234289 ERF JASPAR yes 30833820
chr1 94234279 94234289 ETS1 JASPAR yes 30833821
chr1 94234279 94234289 ETV6 JASPAR yes 30833822
chr1 94234279 94234289 GABPA JASPAR yes 30833823
chr1 94234279 94234289 ERF JASPAR yes 118331348
chr1 94234279 94234289 ETS1 JASPAR yes 118331349
chr1 94234279 94234289 ETV6 JASPAR yes 118331350
chr1 94234279 94234289 GABPA JASPAR yes 118331351
chr1 94234279 94234290 ELK4 JASPAR yes 30833824
chr1 94234279 94234290 FLI1 JASPAR yes 30833825
chr1 94234279 94234290 ELK4 JASPAR yes 118331352
chr1 94234279 94234290 FLI1 JASPAR yes 118331353
chr1 94234280 94234288 EHF JASPAR yes 30833826
chr1 94234280 94234288 FEV JASPAR yes 30833827
chr1 94234280 94234288 EHF JASPAR yes 118331354
chr1 94234280 94234288 FEV JASPAR yes 118331355
chr1 94234281 94234288 SPI1 JASPAR yes 30833828
chr1 94234281 94234288 SPI1 JASPAR yes 118331356
chr1 94234288 94234302 PLAG1 JASPAR yes 30833829
chr1 94234288 94234302 PLAG1 JASPAR yes 118331357
chr1 94234316 94234320 YY1 TRANSFAC yes 30833830
chr1 94234316 94234320 YY1 TRANSFAC yes 118331358
chr1 94234324 94234338 GATA2 JASPAR yes 30833831
chr1 94234324 94234338 GATA2 JASPAR yes 118331359
chr1 94234326 94234334 GATA3 JASPAR yes 30833832
chr1 94234326 94234334 GATA5 JASPAR yes 30833833
chr1 94234326 94234334 GATA3 JASPAR yes 118331360
chr1 94234326 94234334 GATA5 JASPAR yes 118331361
chr1 94234333 94234338 GATA1 TRANSFAC yes 30833834
chr1 94234333 94234338 GATA1 TRANSFAC yes 118331362
chr1 94234348 94234359 FOXA1 JASPAR yes 30833835
chr1 94234348 94234359 FOXA1 JASPAR yes 118331363
chr1 94234350 94234362 FOXI1 JASPAR yes 30833836
chr1 94234350 94234362 FOXI1 JASPAR yes 118331364
chr1 94234376 94234387 GCM1 JASPAR yes 30833837
chr1 94234376 94234387 GCM1 JASPAR yes 118331365
chr1 94234392 94234403 CDX2 JASPAR yes 30833838
chr1 94234392 94234403 CDX2 JASPAR yes 118331366
chr1 94234393 94234404 HOXA10 JASPAR yes 30833839
chr1 94234393 94234404 HOXA10 JASPAR yes 118331367
chr1 94234394 94234403 CDX1 JASPAR yes 30833840
chr1 94234394 94234403 CDX1 JASPAR yes 118331368
chr1 94234394 94234404 HOXA13 JASPAR yes 30833841
chr1 94234394 94234404 HOXB13 JASPAR yes 30833842
chr1 94234394 94234404 HOXD13 JASPAR yes 30833843
chr1 94234394 94234404 HOXA13 JASPAR yes 118331369
chr1 94234394 94234404 HOXB13 JASPAR yes 118331370
chr1 94234394 94234404 HOXD13 JASPAR yes 118331371
SNP sites on vista2513[chr1:94234014-94234407]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 94234018 rs529480971 C T
NHLH1 TFAP4
490469
chr1 94234055 rs116641679 A C
STAT1 STAT3 TLX1
490470
chr1 94234129 rs112206748 G A
GATA2
490471
chr1 94234291 rs534099727 G A
GATA2 PLAG1
490472
chr1 94234306 rs116078092 T C
GATA2
490473
Genes possibly regulated by vista2513[chr1:94234014-94234407]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 94027347 94312706 - BCAR3 ENSG00000137936.12 94312706 0.87 1.0 907 21701
Expression level of Genes
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miRNAs possibly regulated by vista2513[chr1:94234014-94234407]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results