EnhancerDB
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  3. vista25144[chr17:49513112-49513244]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25144[chr17:49513112-49513244]
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Tissue distribution of vista25144
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Transcription factor that possibly regulate vista25144[chr17:49513112-49513244]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 49512981 49513395 CTCF UCSC Txn Factor no Conserved 108272237
chr17 49513105 49513415 FOXA1 UCSC Txn Factor no Conserved 108272261
chr17 49513098 49513118 RREB1 JASPAR yes 21255778
chr17 49513098 49513118 RREB1 JASPAR yes 54766683
chr17 49513100 49513120 RREB1 JASPAR yes 21255779
chr17 49513100 49513120 RREB1 JASPAR yes 54766684
chr17 49513102 49513122 RREB1 JASPAR yes 21255780
chr17 49513102 49513122 RREB1 JASPAR yes 54766687
chr17 49513104 49513119 RUNX2 JASPAR yes 21255781
chr17 49513104 49513119 RUNX2 JASPAR yes 54766688
chr17 49513124 49513134 NFATC3 JASPAR yes 21255782
chr17 49513124 49513134 NFATC3 JASPAR yes 54766689
chr17 49513125 49513132 NFATC2 JASPAR yes 21255783
chr17 49513125 49513132 NFATC2 JASPAR yes 54766690
chr17 49513150 49513161 NFKB1 JASPAR yes 21255784
chr17 49513150 49513161 NFKB1 JASPAR yes 54766691
chr17 49513151 49513161 NFKB1 JASPAR yes 21255785
chr17 49513151 49513161 NFKB1 JASPAR yes 54766692
chr17 49513151 49513162 NFKB1 JASPAR yes 21255786
chr17 49513151 49513162 NFKB1 JASPAR yes 54766693
chr17 49513177 49513185 FOXC1 JASPAR yes 21255787
chr17 49513177 49513185 FOXC1 JASPAR yes 54766694
chr17 49513180 49513195 ZIC4 JASPAR yes 21255788
chr17 49513180 49513195 ZIC4 JASPAR yes 54766695
chr17 49513181 49513191 MAX JASPAR yes 21255789
chr17 49513181 49513191 MAX JASPAR yes 54766696
chr17 49513181 49513195 ZIC1 JASPAR yes 21255790
chr17 49513181 49513195 ZIC1 JASPAR yes 54766697
chr17 49513182 49513192 MAX JASPAR yes 21255791
chr17 49513182 49513192 MNT JASPAR yes 21255792
chr17 49513182 49513192 MAX JASPAR yes 54766698
chr17 49513182 49513192 MNT JASPAR yes 54766699
chr17 49513183 49513190 USF1 JASPAR yes 21255793
chr17 49513183 49513190 USF1 JASPAR yes 54766700
chr17 49513184 49513189 MYC TRANSFAC yes 21255794
chr17 49513184 49513189 USF1 TRANSFAC yes 21255795
chr17 49513184 49513189 USF2 TRANSFAC yes 21255796
chr17 49513184 49513189 MYC TRANSFAC yes 54766701
chr17 49513184 49513189 USF1 TRANSFAC yes 54766702
chr17 49513184 49513189 USF2 TRANSFAC yes 54766703
chr17 49513184 49513191 USF1 JASPAR yes 21255797
chr17 49513184 49513191 USF1 JASPAR yes 54766704
chr17 49513209 49513213 YY1 TRANSFAC yes 21255798
chr17 49513209 49513213 YY1 TRANSFAC yes 54766705
SNP sites on vista25144[chr17:49513112-49513244]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 49513179 rs12450429 A G
CTCF FOXA1 FOXC1
4929901
Genes possibly regulated by vista25144[chr17:49513112-49513244]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista25144[chr17:49513112-49513244]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results