EnhancerDB
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Enhancers that have rs12450429[chr17:49513179]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 49502285 49519023 enh48044
Skin (Keratinocyte) Blood (T-cell) Esophagus Colon (HCT116) Thyroid Pancreas Spleen Thymus Heart
chr17 49513112 49513244 vista25144
VISTA
Transcript factors that have rs12450429[chr17:49513179]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 49511579 49515001 ZNF143 GTRD no Epithelial (MCF-7) 108272221
chr17 49511582 49514925 ZNF143 GTRD no Epithelial (MCF-7) 108272222
chr17 49512302 49514927 ZNF143 GTRD no Epithelial (MCF-7) 108272223
chr17 49512334 49513388 ZNF143 GTRD no Epithelial (MCF-7) 108272224
chr17 49512391 49513454 ZNF274 GTRD no Bone Marrow (K562) 108272225
chr17 49512428 49514454 TCF7L2 GTRD no Colon (HCT116) 21772176
chr17 49512428 49514454 TCF7L2 GTRD no Colon (HCT116) 108272226
chr17 49512432 49513385 TCF7L2 GTRD no Colon (HCT116) 21772177
chr17 49512432 49513385 TCF7L2 GTRD no Colon (HCT116) 108272227
chr17 49512442 49513225 TCF7L2 GTRD no Colon (HCT116) 21772178
chr17 49512442 49513225 TCF7L2 GTRD no Colon (HCT116) 108272228
chr17 49512444 49514954 TCF7L2 GTRD no Colon (HCT116) 21772179
chr17 49512444 49514954 TCF7L2 GTRD no Colon (HCT116) 108272229
chr17 49512469 49513689 TCF7L2 GTRD no Colon (HCT116) 21772180
chr17 49512469 49513689 TCF7L2 GTRD no Colon (HCT116) 108272230
chr17 49512590 49513245 TCF7L2 GTRD no Colon (HCT116) 21772181
chr17 49512590 49513245 TCF7L2 GTRD no Colon (HCT116) 108272231
chr17 49512699 49513382 TCF7L2 GTRD no Colon (HCT116) 21772182
chr17 49512699 49513382 TCF7L2 GTRD no Colon (HCT116) 108272233
chr17 49512828 49513501 ZNF274 GTRD no Blood (GM12878) 108272234
chr17 49512841 49513304 ZNF274 GTRD no Blood (GM12878) 108272235
chr17 49512981 49513341 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108272236
chr17 49512981 49513395 CTCF UCSC Txn Factor no Conserved 108272237
chr17 49512981 49513550 ZNF274 GTRD no Blood (GM12878) 108272238
chr17 49512990 49513466 TCF7L2 GTRD no Colon (HCT116) 21772183
chr17 49512990 49513466 TCF7L2 GTRD no Colon (HCT116) 108272239
chr17 49513008 49513408 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108272240
chr17 49513016 49513586 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108272241
chr17 49513024 49513400 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108272242
chr17 49513027 49513407 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108272243
chr17 49513057 49513307 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108272244
chr17 49513063 49513303 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108272245
chr17 49513064 49513359 ZNF274 GTRD no Blood (GM12878) 108272246
chr17 49513067 49513357 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108272247
chr17 49513070 49513334 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108272248
chr17 49513072 49513442 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108272249
chr17 49513074 49513318 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108272250
chr17 49513080 49513272 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21772184
chr17 49513080 49513272 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108272251
chr17 49513080 49513436 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108272252
chr17 49513084 49513420 ZNF274 GTRD no Blood (GM12878) 108272253
chr17 49513086 49513356 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108272254
chr17 49513092 49513289 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108272255
chr17 49513093 49513269 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108272256
chr17 49513100 49513236 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108272257
chr17 49513100 49513272 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108272258
chr17 49513104 49513334 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108272259
chr17 49513105 49513284 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108272260
chr17 49513105 49513415 FOXA1 UCSC Txn Factor no Conserved 108272261
chr17 49513110 49513310 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108272262
chr17 49513114 49513374 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108272263
chr17 49513130 49513258 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108272264
chr17 49513138 49513401 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108272265
chr17 49513162 49513401 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108272266
chr17 49513177 49513185 FOXC1 JASPAR yes 21255787
chr17 49513177 49513185 FOXC1 JASPAR yes 54766694
Genes associated with rs12450429[chr17:49513179], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More