EnhancerDB
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  3. vista25180[chr17:53361426-53361912]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25180[chr17:53361426-53361912]
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Tissue distribution of vista25180
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Transcription factor that possibly regulate vista25180[chr17:53361426-53361912]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 53360494 53363710 POLR2A UCSC Txn Factor no Conserved 107688370
chr17 53360494 53363710 POLR2A UCSC Txn Factor no Conserved 108272951
chr17 53361490 53361880 EP300 UCSC Txn Factor no Conserved 107688378
chr17 53361490 53361880 EP300 UCSC Txn Factor no Conserved 108272959
chr17 53361571 53361779 CEBPB UCSC Txn Factor no Conserved 107688388
chr17 53361571 53361779 CEBPB UCSC Txn Factor no Conserved 108272969
chr17 53361577 53361831 FOXA1 UCSC Txn Factor no Conserved 107688392
chr17 53361577 53361831 FOXA1 UCSC Txn Factor no Conserved 108272973
chr17 53361428 53361444 SOX8 JASPAR yes 21257109
chr17 53361428 53361444 SOX8 JASPAR yes 54840876
chr17 53361448 53361458 MEF2A JASPAR yes 21257110
chr17 53361448 53361458 MEF2A JASPAR yes 54840877
chr17 53361449 53361453 TEAD2 TRANSFAC yes 21257111
chr17 53361449 53361453 TEAD2 TRANSFAC yes 54840878
chr17 53361449 53361454 TBP TRANSFAC yes 21257112
chr17 53361449 53361454 TBP TRANSFAC yes 54840879
chr17 53361459 53361476 RXRA JASPAR yes 15495
chr17 53361459 53361476 RXRA JASPAR yes 21257113
chr17 53361459 53361476 RXRA JASPAR yes 54840880
chr17 53361462 53361472 MZF1 JASPAR yes 15496
chr17 53361462 53361472 MZF1 JASPAR yes 21257114
chr17 53361462 53361472 MZF1 JASPAR yes 54840881
chr17 53361506 53361509 MYB TRANSFAC yes 15497
chr17 53361506 53361509 MYB TRANSFAC yes 21257115
chr17 53361506 53361509 MYB TRANSFAC yes 54840882
chr17 53361547 53361550 MYB TRANSFAC yes 15498
chr17 53361547 53361550 MYB TRANSFAC yes 21257116
chr17 53361547 53361550 MYB TRANSFAC yes 54840883
chr17 53361580 53361593 SCRT2 JASPAR yes 15499
chr17 53361580 53361593 SCRT2 JASPAR yes 21257117
chr17 53361580 53361593 SCRT2 JASPAR yes 54840884
chr17 53361587 53361592 MYC TRANSFAC yes 15500
chr17 53361587 53361592 MYC TRANSFAC yes 21257118
chr17 53361587 53361592 MYC TRANSFAC yes 54840885
chr17 53361634 53361637 MYB TRANSFAC yes 15501
chr17 53361634 53361637 MYB TRANSFAC yes 21257119
chr17 53361634 53361637 MYB TRANSFAC yes 54840886
chr17 53361666 53361677 CEBPA JASPAR yes 15502
chr17 53361666 53361677 CEBPA JASPAR yes 21257120
chr17 53361666 53361677 CEBPA JASPAR yes 54840887
chr17 53361667 53361677 CEBPB JASPAR yes 15503
chr17 53361667 53361677 CEBPE JASPAR yes 15504
chr17 53361667 53361677 CEBPG JASPAR yes 15505
chr17 53361667 53361677 CEBPB JASPAR yes 21257121
chr17 53361667 53361677 CEBPE JASPAR yes 21257122
chr17 53361667 53361677 CEBPG JASPAR yes 21257123
chr17 53361667 53361677 CEBPB JASPAR yes 54840888
chr17 53361667 53361677 CEBPE JASPAR yes 54840889
chr17 53361667 53361677 CEBPG JASPAR yes 54840890
chr17 53361667 53361678 CEBPB JASPAR yes 15506
chr17 53361667 53361678 CEBPB JASPAR yes 21257124
chr17 53361667 53361678 CEBPB JASPAR yes 54840891
chr17 53361670 53361674 LFA1 TRANSFAC yes 15507
chr17 53361670 53361674 LFA1 TRANSFAC yes 21257125
chr17 53361670 53361674 LFA1 TRANSFAC yes 54840892
chr17 53361680 53361689 NKX2-8 JASPAR yes 15508
chr17 53361680 53361689 NKX2-8 JASPAR yes 21257126
chr17 53361680 53361689 NKX2-8 JASPAR yes 54840893
chr17 53361680 53361690 NKX2-3 JASPAR yes 15509
chr17 53361680 53361690 NKX2-3 JASPAR yes 21257127
chr17 53361680 53361690 NKX2-3 JASPAR yes 54840894
chr17 53361695 53361710 HNF1A JASPAR yes 15510
chr17 53361695 53361710 HNF1A JASPAR yes 21257128
chr17 53361695 53361710 HNF1A JASPAR yes 54840895
chr17 53361696 53361708 HNF1B JASPAR yes 15511
chr17 53361696 53361708 HNF1B JASPAR yes 21257129
chr17 53361696 53361708 HNF1B JASPAR yes 54840896
chr17 53361696 53361709 HNF1B JASPAR yes 15512
chr17 53361696 53361709 HNF1B JASPAR yes 21257130
chr17 53361696 53361709 HNF1B JASPAR yes 54840897
chr17 53361727 53361744 RXRA JASPAR yes 15513
chr17 53361727 53361744 RXRA JASPAR yes 21257131
chr17 53361727 53361744 RXRA JASPAR yes 54840898
chr17 53361746 53361757 FLI1 JASPAR yes 15514
chr17 53361746 53361757 FLI1 JASPAR yes 21257132
chr17 53361746 53361757 FLI1 JASPAR yes 54840899
chr17 53361747 53361760 ELF1 JASPAR yes 15515
chr17 53361747 53361760 ELF1 JASPAR yes 21257133
chr17 53361747 53361760 ELF1 JASPAR yes 54840900
chr17 53361748 53361755 SPI1 JASPAR yes 15516
chr17 53361748 53361755 SPI1 JASPAR yes 21257134
chr17 53361748 53361755 SPI1 JASPAR yes 54840901
chr17 53361748 53361756 EHF JASPAR yes 15517
chr17 53361748 53361756 EHF JASPAR yes 21257135
chr17 53361748 53361756 EHF JASPAR yes 54840902
chr17 53361750 53361757 SPIB JASPAR yes 15518
chr17 53361750 53361757 SPIB JASPAR yes 21257136
chr17 53361750 53361757 SPIB JASPAR yes 54840903
chr17 53361764 53361775 FLI1 JASPAR yes 15519
chr17 53361764 53361775 FLI1 JASPAR yes 21257137
chr17 53361764 53361775 FLI1 JASPAR yes 54840904
chr17 53361765 53361775 ETS1 JASPAR yes 15520
chr17 53361765 53361775 ETS1 JASPAR yes 21257138
chr17 53361765 53361775 ETS1 JASPAR yes 54840905
chr17 53361765 53361776 ETV2 JASPAR yes 15521
chr17 53361765 53361776 ETV2 JASPAR yes 21257139
chr17 53361765 53361776 ETV2 JASPAR yes 54840906
chr17 53361774 53361791 BCL6B JASPAR yes 15522
chr17 53361774 53361791 BCL6B JASPAR yes 21257140
chr17 53361774 53361791 BCL6B JASPAR yes 54840907
chr17 53361775 53361783 FOXO3 JASPAR yes 15523
chr17 53361775 53361783 FOXO3 JASPAR yes 21257141
chr17 53361775 53361783 FOXO3 JASPAR yes 54840908
chr17 53361775 53361790 STAT1 JASPAR yes 15524
chr17 53361775 53361790 STAT1 JASPAR yes 21257142
chr17 53361775 53361790 STAT1 JASPAR yes 54840909
chr17 53361777 53361788 STAT1 JASPAR yes 15525
chr17 53361777 53361788 STAT1 JASPAR yes 21257143
chr17 53361777 53361788 STAT1 JASPAR yes 54840910
chr17 53361784 53361787 MYB TRANSFAC yes 15526
chr17 53361784 53361787 MYB TRANSFAC yes 21257144
chr17 53361784 53361787 MYB TRANSFAC yes 54840911
chr17 53361788 53361798 NKX2-3 JASPAR yes 15527
chr17 53361788 53361798 NKX2-3 JASPAR yes 21257145
chr17 53361788 53361798 NKX2-3 JASPAR yes 54840912
chr17 53361789 53361798 NKX2-8 JASPAR yes 15528
chr17 53361789 53361798 NKX2-8 JASPAR yes 21257146
chr17 53361789 53361798 NKX2-8 JASPAR yes 54840913
chr17 53361795 53361814 REST JASPAR yes 15529
chr17 53361795 53361814 REST JASPAR yes 21257147
chr17 53361795 53361814 REST JASPAR yes 54840914
chr17 53361806 53361818 MYBL1 JASPAR yes 15530
chr17 53361806 53361818 MYBL1 JASPAR yes 21257148
chr17 53361806 53361818 MYBL1 JASPAR yes 54840915
chr17 53361811 53361814 MYB TRANSFAC yes 15531
chr17 53361811 53361814 MYB TRANSFAC yes 21257149
chr17 53361811 53361814 MYB TRANSFAC yes 54840916
chr17 53361811 53361826 PRDM1 JASPAR yes 15532
chr17 53361811 53361826 STAT2 JASPAR yes 15533
chr17 53361811 53361826 PRDM1 JASPAR yes 21257150
chr17 53361811 53361826 STAT2 JASPAR yes 21257151
chr17 53361811 53361826 PRDM1 JASPAR yes 54840917
chr17 53361811 53361826 STAT2 JASPAR yes 54840918
chr17 53361816 53361826 ALX3 JASPAR yes 15534
chr17 53361816 53361826 HESX1 JASPAR yes 15535
chr17 53361816 53361826 ALX3 JASPAR yes 21257152
chr17 53361816 53361826 HESX1 JASPAR yes 21257153
chr17 53361816 53361826 ALX3 JASPAR yes 54840919
chr17 53361816 53361826 HESX1 JASPAR yes 54840920
chr17 53361822 53361827 GATA2 JASPAR yes 15536
chr17 53361822 53361827 GATA2 JASPAR yes 21257154
chr17 53361822 53361827 GATA2 JASPAR yes 54840921
chr17 53361830 53361845 MYBL2 JASPAR yes 15537
chr17 53361830 53361845 MYBL2 JASPAR yes 21257155
chr17 53361830 53361845 MYBL2 JASPAR yes 54840922
chr17 53361836 53361848 GRHL1 JASPAR yes 15538
chr17 53361836 53361848 GRHL1 JASPAR yes 21257156
chr17 53361836 53361848 GRHL1 JASPAR yes 54840923
chr17 53361837 53361840 MYB TRANSFAC yes 15539
chr17 53361837 53361840 MYB TRANSFAC yes 21257157
chr17 53361837 53361840 MYB TRANSFAC yes 54840924
chr17 53361837 53361847 TFCP2 JASPAR yes 15540
chr17 53361837 53361847 TFCP2 JASPAR yes 21257158
chr17 53361837 53361847 TFCP2 JASPAR yes 54840925
chr17 53361853 53361856 MYB TRANSFAC yes 15541
chr17 53361853 53361856 MYB TRANSFAC yes 21257159
chr17 53361853 53361856 MYB TRANSFAC yes 54840926
chr17 53361867 53361876 ZEB1 JASPAR yes 15542
chr17 53361867 53361876 ZEB1 JASPAR yes 21257160
chr17 53361867 53361876 ZEB1 JASPAR yes 54840927
chr17 53361870 53361875 USF2 TRANSFAC yes 15543
chr17 53361870 53361875 USF2 TRANSFAC yes 21257161
chr17 53361870 53361875 USF2 TRANSFAC yes 54840928
chr17 53361896 53361908 NHLH1 JASPAR yes 15544
chr17 53361896 53361908 NHLH1 JASPAR yes 21257162
chr17 53361896 53361908 NHLH1 JASPAR yes 54840929
chr17 53361897 53361907 NHLH1 JASPAR yes 15545
chr17 53361897 53361907 NHLH1 JASPAR yes 21257163
chr17 53361897 53361907 NHLH1 JASPAR yes 54840930
chr17 53361905 53361920 MEF2A JASPAR yes 15546
chr17 53361905 53361920 MEF2A JASPAR yes 21257164
chr17 53361905 53361920 MEF2A JASPAR yes 54840931
chr17 53361906 53361918 MEF2A JASPAR yes 15547
chr17 53361906 53361918 MEF2B JASPAR yes 15548
chr17 53361906 53361918 MEF2D JASPAR yes 15549
chr17 53361906 53361918 MEF2A JASPAR yes 21257165
chr17 53361906 53361918 MEF2B JASPAR yes 21257166
chr17 53361906 53361918 MEF2D JASPAR yes 21257167
chr17 53361906 53361918 MEF2A JASPAR yes 54840932
chr17 53361906 53361918 MEF2B JASPAR yes 54840933
chr17 53361906 53361918 MEF2D JASPAR yes 54840934
chr17 53361907 53361917 MEF2A JASPAR yes 15550
chr17 53361907 53361917 MEF2A JASPAR yes 21257168
chr17 53361907 53361917 MEF2A JASPAR yes 54840935
chr17 53361908 53361918 EMX1 JASPAR yes 15551
chr17 53361908 53361918 EMX2 JASPAR yes 15552
chr17 53361908 53361918 EVX1 JASPAR yes 15553
chr17 53361908 53361918 EVX2 JASPAR yes 15554
chr17 53361908 53361918 HESX1 JASPAR yes 15555
chr17 53361908 53361918 HOXA2 JASPAR yes 15556
chr17 53361908 53361918 HOXB2 JASPAR yes 15557
chr17 53361908 53361918 LHX2 JASPAR yes 15558
chr17 53361908 53361918 LHX6 JASPAR yes 15559
chr17 53361908 53361918 MEOX1 JASPAR yes 15560
chr17 53361908 53361918 MEOX2 JASPAR yes 15561
chr17 53361908 53361918 NOTO JASPAR yes 15562
chr17 53361908 53361918 EMX1 JASPAR yes 21257169
chr17 53361908 53361918 EMX2 JASPAR yes 21257170
chr17 53361908 53361918 EVX1 JASPAR yes 21257171
chr17 53361908 53361918 EVX2 JASPAR yes 21257172
chr17 53361908 53361918 HESX1 JASPAR yes 21257173
chr17 53361908 53361918 HOXA2 JASPAR yes 21257174
chr17 53361908 53361918 HOXB2 JASPAR yes 21257175
chr17 53361908 53361918 LHX2 JASPAR yes 21257176
chr17 53361908 53361918 LHX6 JASPAR yes 21257177
chr17 53361908 53361918 MEOX1 JASPAR yes 21257178
chr17 53361908 53361918 MEOX2 JASPAR yes 21257179
chr17 53361908 53361918 NOTO JASPAR yes 21257180
chr17 53361908 53361918 EMX1 JASPAR yes 54840936
chr17 53361908 53361918 EMX2 JASPAR yes 54840937
chr17 53361908 53361918 EVX1 JASPAR yes 54840938
chr17 53361908 53361918 EVX2 JASPAR yes 54840939
chr17 53361908 53361918 HESX1 JASPAR yes 54840940
chr17 53361908 53361918 HOXA2 JASPAR yes 54840941
chr17 53361908 53361918 HOXB2 JASPAR yes 54840942
chr17 53361908 53361918 LHX2 JASPAR yes 54840943
chr17 53361908 53361918 LHX6 JASPAR yes 54840944
chr17 53361908 53361918 MEOX1 JASPAR yes 54840945
chr17 53361908 53361918 MEOX2 JASPAR yes 54840946
chr17 53361908 53361918 NOTO JASPAR yes 54840947
chr17 53361909 53361917 LBX1 JASPAR yes 15563
chr17 53361909 53361917 PDX1 JASPAR yes 15564
chr17 53361909 53361917 VAX1 JASPAR yes 15565
chr17 53361909 53361917 VAX2 JASPAR yes 15566
chr17 53361909 53361917 VSX1 JASPAR yes 15567
chr17 53361909 53361917 VSX2 JASPAR yes 15568
chr17 53361909 53361917 LBX1 JASPAR yes 21257181
chr17 53361909 53361917 PDX1 JASPAR yes 21257182
chr17 53361909 53361917 VAX1 JASPAR yes 21257183
chr17 53361909 53361917 VAX2 JASPAR yes 21257184
chr17 53361909 53361917 VSX1 JASPAR yes 21257185
chr17 53361909 53361917 VSX2 JASPAR yes 21257186
chr17 53361909 53361917 LBX1 JASPAR yes 54840948
chr17 53361909 53361917 PDX1 JASPAR yes 54840949
chr17 53361909 53361917 VAX1 JASPAR yes 54840950
chr17 53361909 53361917 VAX2 JASPAR yes 54840951
chr17 53361909 53361917 VSX1 JASPAR yes 54840952
chr17 53361909 53361917 VSX2 JASPAR yes 54840953
chr17 53361909 53361919 POU6F2 JASPAR yes 15569
chr17 53361909 53361919 POU6F2 JASPAR yes 21257187
chr17 53361909 53361919 POU6F2 JASPAR yes 54840954
SNP sites on vista25180[chr17:53361426-53361912]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 53361788 rs59688920 C T
BCL6B EP300 FOXA1 NKX2-3 POLR2A STAT1
4938284
chr17 53361821 rs116001454 A G
ALX3 EP300 FOXA1 HESX1 POLR2A PRDM1 STAT2
4938285
chr17 53361838 rs1477141 T G
EP300 GRHL1 MYB MYBL2 POLR2A TFCP2
4938286
chr17 53361889 rs539624374 G C
POLR2A
4938287
Genes possibly regulated by vista25180[chr17:53361426-53361912]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 53342373 53402426 + HLF ENSG00000108924.9 53342373 0.87 0.94 16060 80947
Expression level of Genes
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miRNAs possibly regulated by vista25180[chr17:53361426-53361912]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results