EnhancerDB
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  3. rs116001454[chr17:53361821]
Enhancers that have rs116001454[chr17:53361821]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 53348704 53365595 enh17226
Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Stomach Muscle (A673) Placenta Thyroid Pancreas Muscle (Myotube) Uterus Heart
chr17 53361426 53361912 vista25180
VISTA
chr17 53361463 53363899 vista703
VISTA
Transcript factors that have rs116001454[chr17:53361821]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 53360494 53363585 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107688369
chr17 53360494 53363585 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108272950
chr17 53360494 53363710 POLR2A UCSC Txn Factor no Conserved 107688370
chr17 53360494 53363710 POLR2A UCSC Txn Factor no Conserved 108272951
chr17 53361373 53361937 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107688372
chr17 53361373 53361937 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108272953
chr17 53361453 53361930 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107688375
chr17 53361453 53361930 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108272956
chr17 53361479 53361849 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107688376
chr17 53361479 53361849 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108272957
chr17 53361479 53361879 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107688377
chr17 53361479 53361879 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108272958
chr17 53361490 53361880 EP300 UCSC Txn Factor no Conserved 107688378
chr17 53361490 53361880 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107688379
chr17 53361490 53361880 EP300 UCSC Txn Factor no Conserved 108272959
chr17 53361490 53361880 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108272960
chr17 53361503 53361843 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107688380
chr17 53361503 53361843 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108272961
chr17 53361515 53361924 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107688381
chr17 53361515 53361924 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108272962
chr17 53361524 53361860 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107688382
chr17 53361524 53361860 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108272963
chr17 53361529 53361985 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107688383
chr17 53361529 53361985 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108272964
chr17 53361544 53361834 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107688386
chr17 53361544 53361834 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108272967
chr17 53361561 53361821 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107688387
chr17 53361561 53361821 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108272968
chr17 53361577 53361824 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107688391
chr17 53361577 53361824 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108272972
chr17 53361577 53361831 FOXA1 UCSC Txn Factor no Conserved 107688392
chr17 53361577 53361831 FOXA1 UCSC Txn Factor no Conserved 108272973
chr17 53361578 53362038 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107688393
chr17 53361578 53362038 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108272974
chr17 53361587 53361846 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107688394
chr17 53361587 53361846 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108272975
chr17 53361595 53361871 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107688397
chr17 53361595 53361871 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108272978
chr17 53361620 53361864 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107688398
chr17 53361620 53361864 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108272979
chr17 53361626 53361942 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107688399
chr17 53361626 53361942 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108272980
chr17 53361630 53361890 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107688400
chr17 53361630 53361890 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108272981
chr17 53361701 53362077 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107688402
chr17 53361701 53362077 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108272983
chr17 53361811 53361826 PRDM1 JASPAR yes 15532
chr17 53361811 53361826 STAT2 JASPAR yes 15533
chr17 53361811 53361826 PRDM1 JASPAR yes 21257150
chr17 53361811 53361826 STAT2 JASPAR yes 21257151
chr17 53361811 53361826 PRDM1 JASPAR yes 54840917
chr17 53361811 53361826 STAT2 JASPAR yes 54840918
chr17 53361816 53361826 ALX3 JASPAR yes 15534
chr17 53361816 53361826 HESX1 JASPAR yes 15535
chr17 53361816 53361826 ALX3 JASPAR yes 21257152
chr17 53361816 53361826 HESX1 JASPAR yes 21257153
chr17 53361816 53361826 ALX3 JASPAR yes 54840919
chr17 53361816 53361826 HESX1 JASPAR yes 54840920
Genes associated with rs116001454[chr17:53361821], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More