EnhancerDB
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  3. vista25185[chr17:53497797-53498268]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25185[chr17:53497797-53498268]
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Tissue distribution of vista25185
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Transcription factor that possibly regulate vista25185[chr17:53497797-53498268]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 53497401 53500397 POLR2A UCSC Txn Factor no Conserved 108272990
chr17 53497401 53500397 POLR2A UCSC Txn Factor no Conserved 108272991
chr17 53497827 53497838 FLI1 JASPAR yes 21257356
chr17 53497827 53497840 ELF3 JASPAR yes 21257357
chr17 53497828 53497839 ELF5 JASPAR yes 21257358
chr17 53497828 53497840 ELF4 JASPAR yes 21257359
chr17 53497829 53497837 EHF JASPAR yes 21257360
chr17 53497845 53497860 RFX5 JASPAR yes 21257361
chr17 53497866 53497870 YY1 TRANSFAC yes 21257362
chr17 53497896 53497917 ZNF263 JASPAR yes 21257363
chr17 53497898 53497910 TEAD1 JASPAR yes 21257364
chr17 53497899 53497905 PEA3 TRANSFAC yes 21257365
chr17 53497899 53497920 ZNF263 JASPAR yes 21257366
chr17 53497900 53497921 ZNF263 JASPAR yes 21257367
chr17 53497910 53497925 NR2C2 JASPAR yes 21257368
chr17 53497911 53497925 RXRB JASPAR yes 21257369
chr17 53497911 53497925 RXRG JASPAR yes 21257370
chr17 53497912 53497929 RXRA JASPAR yes 21257371
chr17 53497919 53497940 ZNF263 JASPAR yes 21257372
chr17 53497920 53497924 LFA1 TRANSFAC yes 21257373
chr17 53497929 53497933 LFA1 TRANSFAC yes 21257374
chr17 53497938 53497943 NFY TRANSFAC yes 21257375
chr17 53497938 53497959 IRF1 JASPAR yes 21257376
chr17 53497942 53497957 FOXP1 JASPAR yes 21257377
chr17 53497942 53497963 IRF1 JASPAR yes 21257378
chr17 53497943 53497958 FOXP1 JASPAR yes 21257379
chr17 53497944 53497965 IRF1 JASPAR yes 21257380
chr17 53497954 53497969 FOXA1 JASPAR yes 21257381
chr17 53497970 53497985 MEF2C JASPAR yes 21257382
chr17 53498007 53498022 STAT1 JASPAR yes 21257383
chr17 53498009 53498020 STAT1 JASPAR yes 21257384
chr17 53498009 53498020 STAT3 JASPAR yes 21257385
chr17 53498019 53498024 H4TF1 TRANSFAC yes 21257386
chr17 53498028 53498032 YY1 TRANSFAC yes 21257387
chr17 53498041 53498062 ZNF263 JASPAR yes 21257388
chr17 53498045 53498053 MEIS3 JASPAR yes 21257389
chr17 53498046 53498050 NFE TRANSFAC yes 21257390
chr17 53498055 53498067 INSM1 JASPAR yes 21257391
chr17 53498055 53498069 GLIS2 JASPAR yes 21257392
chr17 53498068 53498079 GCM1 JASPAR yes 21257393
chr17 53498080 53498093 HSF1 JASPAR yes 21257394
chr17 53498083 53498087 H4TF2 TRANSFAC yes 21257395
chr17 53498088 53498098 NFKB1 JASPAR yes 21257396
chr17 53498088 53498098 RELA JASPAR yes 21257397
chr17 53498098 53498104 SOX10 JASPAR yes 21257398
chr17 53498113 53498125 BHLHE23 JASPAR yes 21257399
chr17 53498114 53498124 BHLHE22 JASPAR yes 21257400
chr17 53498114 53498124 NEUROD2 JASPAR yes 21257401
chr17 53498114 53498124 NEUROG2 JASPAR yes 21257402
chr17 53498114 53498124 OLIG1 JASPAR yes 21257403
chr17 53498114 53498124 OLIG2 JASPAR yes 21257404
chr17 53498114 53498124 OLIG3 JASPAR yes 21257405
chr17 53498120 53498135 TFAP2C JASPAR yes 21257406
chr17 53498121 53498132 EBF1 JASPAR yes 21257407
chr17 53498128 53498148 PPARG JASPAR yes 21257408
chr17 53498129 53498149 PPARG JASPAR yes 21257409
chr17 53498133 53498147 RXRB JASPAR yes 21257410
chr17 53498133 53498147 RXRG JASPAR yes 21257411
chr17 53498133 53498148 HNF4G JASPAR yes 21257412
chr17 53498133 53498148 NR2C2 JASPAR yes 21257413
chr17 53498134 53498149 PRDM1 JASPAR yes 21257414
chr17 53498139 53498153 RORA JASPAR yes 21257415
chr17 53498143 53498152 NKX3-2 JASPAR yes 21257416
chr17 53498143 53498153 NKX2-3 JASPAR yes 21257417
chr17 53498144 53498152 ISL2 JASPAR yes 21257418
chr17 53498144 53498153 NKX2-8 JASPAR yes 21257419
chr17 53498150 53498165 FOXP1 JASPAR yes 21257420
chr17 53498150 53498171 IRF1 JASPAR yes 21257421
chr17 53498154 53498169 STAT2 JASPAR yes 21257422
chr17 53498160 53498170 REL JASPAR yes 21257423
chr17 53498173 53498180 SPIB JASPAR yes 21257424
chr17 53498193 53498196 MYB TRANSFAC yes 21257425
chr17 53498193 53498209 ZNF143 JASPAR yes 21257426
chr17 53498203 53498212 SOX9 JASPAR yes 21257427
chr17 53498214 53498227 NFKB1 JASPAR yes 21257428
chr17 53498219 53498233 PLAG1 JASPAR yes 21257429
chr17 53498220 53498233 TFAP2B JASPAR yes 21257430
chr17 53498232 53498252 ESR1 JASPAR yes 21257431
chr17 53498235 53498253 ESR2 JASPAR yes 21257432
chr17 53498236 53498253 ESR1 JASPAR yes 21257433
chr17 53498237 53498252 ESR2 JASPAR yes 21257434
chr17 53498258 53498268 REL JASPAR yes 21257435
chr17 53498261 53498265 YY1 TRANSFAC yes 21257436
SNP sites on vista25185[chr17:53497797-53498268]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 53497909 rs547069497 A G
POLR2A TEAD1 ZNF263
4939105
chr17 53497916 rs397716332 T TG
NR2C2 POLR2A RXRA RXRB RXRG ZNF263
4939106
chr17 53497916 rs58253562 T TG
NR2C2 POLR2A RXRA RXRB RXRG ZNF263
4939107
chr17 53498207 rs186001556 T C
POLR2A SOX9 ZNF143
4939108
chr17 53498255 rs573933957 A G
POLR2A
4939109
Genes possibly regulated by vista25185[chr17:53497797-53498268]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 53469974 53499353 - MMD ENSG00000108960.3 53499353 0.74 0.98 16061 98915
Expression level of Genes
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miRNAs possibly regulated by vista25185[chr17:53497797-53498268]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results