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- rs397716332[chr17:53497916]
Enhancers that have rs397716332[chr17:53497916]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr17 |
53497797 |
53498268 |
vista25185 |
|
|
Transcript factors that have rs397716332[chr17:53497916]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr17
|
53497401
|
53500397
|
POLR2A
|
UCSC Txn Factor
|
no
|
Conserved
|
108272990
|
|
|
chr17
|
53497401
|
53500397
|
POLR2A
|
UCSC Txn Factor
|
no
|
Conserved
|
108272991
|
|
|
chr17
|
53497415
|
53499347
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108272992
|
|
|
chr17
|
53497415
|
53499347
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108272993
|
|
|
chr17
|
53497546
|
53497946
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108273007
|
|
|
chr17
|
53497546
|
53497946
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108273008
|
|
|
chr17
|
53497876
|
53498332
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Liver (HepG2)
|
108273009
|
|
|
chr17
|
53497896
|
53497917
|
ZNF263
|
JASPAR
|
yes
|
|
21257363
|
|
|
chr17
|
53497899
|
53497920
|
ZNF263
|
JASPAR
|
yes
|
|
21257366
|
|
|
chr17
|
53497900
|
53497921
|
ZNF263
|
JASPAR
|
yes
|
|
21257367
|
|
|
chr17
|
53497910
|
53497925
|
NR2C2
|
JASPAR
|
yes
|
|
21257368
|
|
|
chr17
|
53497911
|
53497925
|
RXRB
|
JASPAR
|
yes
|
|
21257369
|
|
|
chr17
|
53497911
|
53497925
|
RXRG
|
JASPAR
|
yes
|
|
21257370
|
|
|
chr17
|
53497912
|
53497929
|
RXRA
|
JASPAR
|
yes
|
|
21257371
|
|
Genes associated with rs397716332[chr17:53497916], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr17
|
53796988
|
53809482
|
-
|
TMEM100
|
ENSG00000166292.7
|
53809482
|
299072
|
Heart
|
0.303388
|
16062
|
|