EnhancerDB
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  3. vista25201[chr17:54669912-54670125]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25201[chr17:54669912-54670125]
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Tissue distribution of vista25201
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Transcription factor that possibly regulate vista25201[chr17:54669912-54670125]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 54669818 54670370 CTCF UCSC Txn Factor no Conserved 108273135
chr17 54669864 54670140 EGR1 UCSC Txn Factor no Conserved 108273142
chr17 54669878 54670165 SMC3 UCSC Txn Factor no Conserved 108273148
chr17 54669885 54670158 RAD21 UCSC Txn Factor no Conserved 108273152
chr17 54669942 54669946 LFA1 TRANSFAC yes 21257997
chr17 54669951 54669955 LFA1 TRANSFAC yes 21257998
chr17 54669967 54669986 PAX5 JASPAR yes 21257999
chr17 54669978 54669983 SP1 TRANSFAC yes 21258000
chr17 54669978 54669984 SP1 TRANSFAC yes 21258001
chr17 54669978 54669985 SP1 TRANSFAC yes 21258002
chr17 54669979 54669987 WT1 TRANSFAC yes 21258003
chr17 54669982 54669988 SP1 TRANSFAC yes 21258004
chr17 54669992 54670002 ID4 JASPAR yes 21258005
chr17 54669992 54670002 TCF4 JASPAR yes 21258006
chr17 54670013 54670032 CTCF JASPAR yes 21258007
chr17 54670029 54670039 SP1 JASPAR yes 21258008
chr17 54670030 54670045 TFAP2C JASPAR yes 21258009
chr17 54670031 54670036 SP1 TRANSFAC yes 21258010
chr17 54670031 54670037 SP1 TRANSFAC yes 21258011
chr17 54670031 54670038 SP1 TRANSFAC yes 21258012
chr17 54670032 54670044 TFAP2A JASPAR yes 21258013
chr17 54670032 54670044 TFAP2B JASPAR yes 21258014
chr17 54670032 54670044 TFAP2C JASPAR yes 21258015
chr17 54670032 54670046 EBF1 JASPAR yes 21258016
chr17 54670033 54670044 EBF1 JASPAR yes 21258017
chr17 54670052 54670063 NRF1 JASPAR yes 21258018
chr17 54670062 54670083 ZNF263 JASPAR yes 21258019
chr17 54670068 54670073 SP1 TRANSFAC yes 21258020
chr17 54670069 54670074 SP1 TRANSFAC yes 21258021
chr17 54670082 54670093 TFAP2A JASPAR yes 21258022
chr17 54670082 54670093 TFAP2B JASPAR yes 21258023
chr17 54670082 54670093 TFAP2C JASPAR yes 21258024
chr17 54670102 54670115 TFAP2A JASPAR yes 21258025
chr17 54670102 54670115 TFAP2B JASPAR yes 21258026
chr17 54670102 54670115 TFAP2C JASPAR yes 21258027
chr17 54670103 54670118 TFAP2A JASPAR yes 21258028
chr17 54670103 54670118 TFAP2C JASPAR yes 21258029
chr17 54670104 54670115 TFAP2A JASPAR yes 21258030
chr17 54670104 54670115 TFAP2B JASPAR yes 21258031
chr17 54670104 54670115 TFAP2C JASPAR yes 21258032
SNP sites on vista25201[chr17:54669912-54670125]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 54670087 rs549779601 G T
CTCF EGR1 RAD21 SMC3 TFAP2A TFAP2B TFAP2C
4943630
Genes possibly regulated by vista25201[chr17:54669912-54670125]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 54671060 54672951 + NOG ENSG00000183691.4 54671060 0.91 0.92 16065 99065
Expression level of Genes
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miRNAs possibly regulated by vista25201[chr17:54669912-54670125]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results