EnhancerDB
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  3. rs549779601[chr17:54670087]
Enhancers that have rs549779601[chr17:54670087]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 54669912 54670125 vista25201
VISTA
Transcript factors that have rs549779601[chr17:54670087]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 54669500 54670290 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108273130
chr17 54669742 54670532 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108273131
chr17 54669775 54670295 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108273132
chr17 54669780 54670244 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108273133
chr17 54669801 54670471 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108273134
chr17 54669818 54670370 CTCF UCSC Txn Factor no Conserved 108273135
chr17 54669827 54670357 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108273136
chr17 54669833 54670203 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108273137
chr17 54669836 54670212 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108273138
chr17 54669846 54670236 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108273139
chr17 54669852 54670176 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108273140
chr17 54669862 54670172 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108273141
chr17 54669864 54670140 EGR1 UCSC Txn Factor no Conserved 108273142
chr17 54669864 54670140 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108273143
chr17 54669866 54670382 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108273144
chr17 54669868 54670172 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108273145
chr17 54669873 54670163 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108273146
chr17 54669878 54670148 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108273147
chr17 54669878 54670165 SMC3 UCSC Txn Factor no Conserved 108273148
chr17 54669881 54670171 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108273149
chr17 54669883 54670138 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108273150
chr17 54669885 54670098 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108273151
chr17 54669885 54670158 RAD21 UCSC Txn Factor no Conserved 108273152
chr17 54669888 54670168 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108273154
chr17 54669893 54670163 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108273155
chr17 54669893 54670183 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108273156
chr17 54669895 54670165 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108273157
chr17 54669905 54670123 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108273158
chr17 54669914 54670137 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108273160
chr17 54669914 54670144 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108273161
chr17 54669915 54670145 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108273162
chr17 54669919 54670139 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108273163
chr17 54669929 54670133 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108273165
chr17 54669941 54670107 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108273167
chr17 54669941 54670110 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108273168
chr17 54669965 54670090 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108273171
chr17 54670010 54670370 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108273172
chr17 54670045 54670549 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108273173
chr17 54670082 54670093 TFAP2A JASPAR yes 21258022
chr17 54670082 54670093 TFAP2B JASPAR yes 21258023
chr17 54670082 54670093 TFAP2C JASPAR yes 21258024
chr17 54670086 54670350 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108273174
Genes associated with rs549779601[chr17:54670087], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More