EnhancerDB
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  3. vista25213[chr17:54993018-54993544]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25213[chr17:54993018-54993544]
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Tissue distribution of vista25213
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Transcription factor that possibly regulate vista25213[chr17:54993018-54993544]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 54990254 54993785 POLR2A UCSC Txn Factor no Conserved 108273427
chr17 54993044 54993436 STAT1 UCSC Txn Factor no Conserved 108273489
chr17 54993052 54993387 GATA2 UCSC Txn Factor no Conserved 108273493
chr17 54993054 54993491 STAT3 UCSC Txn Factor no Conserved 108273494
chr17 54993063 54993564 JUND UCSC Txn Factor no Conserved 108273497
chr17 54993101 54993579 FOSL2 UCSC Txn Factor no Conserved 108273505
chr17 54993101 54993659 EP300 UCSC Txn Factor no Conserved 108273507
chr17 54993132 54993695 FOS UCSC Txn Factor no Conserved 108273515
chr17 54993260 54993584 CEBPB UCSC Txn Factor no Conserved 108273548
chr17 54993284 54993469 NFYB UCSC Txn Factor no Conserved 108273550
chr17 54993293 54993543 ZKSCAN1 UCSC Txn Factor no Conserved 108273556
chr17 54993021 54993042 ZNF263 JASPAR yes 21258583
chr17 54993022 54993039 ZNF410 JASPAR yes 21258584
chr17 54993024 54993045 ZNF263 JASPAR yes 21258585
chr17 54993032 54993037 GATA2 JASPAR yes 21258586
chr17 54993032 54993053 IRF1 JASPAR yes 21258587
chr17 54993034 54993049 IRF9 JASPAR yes 21258588
chr17 54993035 54993043 FEV JASPAR yes 21258589
chr17 54993036 54993050 STAT1 JASPAR yes 21258590
chr17 54993036 54993051 PRDM1 JASPAR yes 21258591
chr17 54993036 54993051 STAT2 JASPAR yes 21258592
chr17 54993037 54993049 IRF1 JASPAR yes 21258593
chr17 54993041 54993047 TCF4 TRANSFAC yes 21258594
chr17 54993063 54993067 YY1 TRANSFAC yes 21258595
chr17 54993068 54993088 RREB1 JASPAR yes 21258596
chr17 54993070 54993085 FOXP1 JASPAR yes 21258597
chr17 54993071 54993086 FOXP1 JASPAR yes 21258598
chr17 54993071 54993092 IRF1 JASPAR yes 21258599
chr17 54993072 54993087 FOXP1 JASPAR yes 21258600
chr17 54993072 54993093 IRF1 JASPAR yes 21258601
chr17 54993073 54993088 FOXP1 JASPAR yes 21258602
chr17 54993144 54993150 NFIC JASPAR yes 21258603
chr17 54993144 54993158 TLX1 JASPAR yes 21258604
chr17 54993145 54993159 TLX1 JASPAR yes 21258605
chr17 54993175 54993186 NFKB1 JASPAR yes 21258606
chr17 54993184 54993195 CDX2 JASPAR yes 21258607
chr17 54993186 54993195 CDX1 JASPAR yes 21258608
chr17 54993186 54993196 HOXA13 JASPAR yes 21258609
chr17 54993186 54993196 HOXB13 JASPAR yes 21258610
chr17 54993219 54993234 HSF1 JASPAR yes 21258611
chr17 54993221 54993238 BCL6B JASPAR yes 21258612
chr17 54993222 54993237 STAT1 JASPAR yes 21258613
chr17 54993224 54993235 STAT1 JASPAR yes 21258614
chr17 54993224 54993235 STAT3 JASPAR yes 21258615
chr17 54993238 54993251 NFKB1 JASPAR yes 21258616
chr17 54993240 54993250 REL JASPAR yes 21258617
chr17 54993245 54993259 RXRB JASPAR yes 21258618
chr17 54993245 54993259 RXRG JASPAR yes 21258619
chr17 54993245 54993260 NR2C2 JASPAR yes 21258620
chr17 54993248 54993261 NR2F1 JASPAR yes 21258621
chr17 54993251 54993265 RORA JASPAR yes 21258622
chr17 54993252 54993262 RORA JASPAR yes 21258623
chr17 54993257 54993261 YY1 TRANSFAC yes 21258624
chr17 54993280 54993291 FOSL2 JASPAR yes 21258625
chr17 54993280 54993291 JUNB JASPAR yes 21258626
chr17 54993281 54993292 FOS JASPAR yes 21258627
chr17 54993281 54993292 JUND JASPAR yes 21258628
chr17 54993281 54993292 NFE2 JASPAR yes 21258629
chr17 54993298 54993309 FOXH1 JASPAR yes 21258630
chr17 54993302 54993316 IRF7 JASPAR yes 21258631
chr17 54993338 54993353 NFYB JASPAR yes 21258632
chr17 54993340 54993356 NFYA JASPAR yes 21258633
chr17 54993341 54993359 NFYA JASPAR yes 21258634
chr17 54993345 54993349 H1TF2 TRANSFAC yes 21258635
chr17 54993345 54993349 NFE TRANSFAC yes 21258636
chr17 54993345 54993349 SRF TRANSFAC yes 21258637
chr17 54993346 54993367 ZNF263 JASPAR yes 21258638
chr17 54993349 54993370 ZNF263 JASPAR yes 21258639
chr17 54993378 54993388 TEAD1 JASPAR yes 21258640
chr17 54993378 54993388 TEAD4 JASPAR yes 21258641
chr17 54993392 54993407 FOXA1 JASPAR yes 21258642
chr17 54993395 54993406 FOXB1 JASPAR yes 21258643
chr17 54993395 54993406 FOXC1 JASPAR yes 21258644
chr17 54993396 54993400 YY1 TRANSFAC yes 21258645
chr17 54993443 54993454 BATF JASPAR yes 21258646
chr17 54993443 54993457 SPIC JASPAR yes 21258647
chr17 54993444 54993455 JUNB JASPAR yes 21258648
chr17 54993445 54993456 FOS JASPAR yes 21258649
chr17 54993447 54993453 JUN TRANSFAC yes 21258650
chr17 54993452 54993466 JUN JASPAR yes 21258651
chr17 54993458 54993469 BATF JASPAR yes 21258652
chr17 54993482 54993496 SPI1 JASPAR yes 21258653
chr17 54993482 54993496 SPIC JASPAR yes 21258654
chr17 54993483 54993496 ELF1 JASPAR yes 21258655
chr17 54993484 54993497 ELF3 JASPAR yes 21258656
chr17 54993485 54993496 ELF5 JASPAR yes 21258657
chr17 54993486 54993497 FLI1 JASPAR yes 21258658
chr17 54993526 54993531 TFAP2A TRANSFAC yes 21258659
chr17 54993526 54993532 MZF1 JASPAR yes 21258660
chr17 54993539 54993543 H4TF2 TRANSFAC yes 21258661
SNP sites on vista25213[chr17:54993018-54993544]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 54993081 rs566397587 A G
FOXP1 GATA2 IRF1 JUND POLR2A RREB1 STAT1 STAT3
4945780
chr17 54993095 rs540164558 T A
GATA2 JUND POLR2A STAT1 STAT3
4945781
chr17 54993150 rs374381422 A T
EP300 FOS FOSL2 GATA2 JUND NFIC POLR2A STAT1 STAT3 TLX1
4945782
chr17 54993164 rs141061262 C T
EP300 FOS FOSL2 GATA2 JUND POLR2A STAT1 STAT3
4945783
chr17 54993188 rs190178785 C T
CDX1 CDX2 EP300 FOS FOSL2 GATA2 HOXA13 HOXB13 JUND POLR2A STAT1 STAT3
4945784
chr17 54993221 rs143267329 G A
BCL6B EP300 FOS FOSL2 GATA2 HSF1 JUND POLR2A STAT1 STAT3
4945785
chr17 54993224 rs74959203 G C
BCL6B EP300 FOS FOSL2 GATA2 HSF1 JUND POLR2A STAT1 STAT3
4945786
chr17 54993282 rs59023417 A G
CEBPB EP300 FOS FOSL2 GATA2 JUNB JUND NFE2 POLR2A STAT1 STAT3
4945787
chr17 54993325 rs113401488 G T
CEBPB EP300 FOS FOSL2 GATA2 JUND NFYB POLR2A STAT1 STAT3 ZKSCAN1
4945788
chr17 54993355 rs11869863 A T
CEBPB EP300 FOS FOSL2 GATA2 JUND NFYA NFYB POLR2A STAT1 STAT3 ZKSCAN1 ZNF263
4945789
chr17 54993377 rs375286051 A T
CEBPB EP300 FOS FOSL2 GATA2 JUND NFYB POLR2A STAT1 STAT3 ZKSCAN1
4945790
Genes possibly regulated by vista25213[chr17:54993018-54993544]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 54869274 54916134 - C17orf67 ENSG00000214226.4 54916134 0.84 0.98 16066 23116
chr17 54911460 54946036 + DGKE ENSG00000153933.5 54911460 0.76 0.98 16067 18442
chr17 54965270 54991399 - TRIM25 ENSG00000121060.10 54991399 0.71 1.0 16068 98381
chr17 55015548 55038415 - COIL ENSG00000121058.4 55038415 0.61 0.99 16069 55129
chr17 55055466 55084129 + SCPEP1 ENSG00000121064.8 55055466 0.77 0.99 16070 38078
Expression level of Genes
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miRNAs possibly regulated by vista25213[chr17:54993018-54993544]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr17 54968642 54968664 - hsa-miR-3614-3p MIMAT0017993 54991408 0.000267022696929239 0.932496 0.676023 722
Expression level of miRNAs
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