EnhancerDB
  1. Home
  2. SNP
  3. rs540164558[chr17:54993095]
Enhancers that have rs540164558[chr17:54993095]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 54993018 54993544 vista25213
VISTA
Transcript factors that have rs540164558[chr17:54993095]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 54990254 54993785 POLR2A UCSC Txn Factor no Conserved 108273427
chr17 54992491 54993751 ZBTB33 GTRD no Lung (A549) 108273428
chr17 54992604 54993708 ZNF274 GTRD no Bone Marrow (K562) 108273430
chr17 54992616 54993791 ZBTB33 GTRD no Lung (A549) 108273431
chr17 54992656 54993486 ZBTB33 GTRD no Lung (A549) 108273433
chr17 54992658 54993495 ZNF143 GTRD no Epithelial (MCF-7) 108273434
chr17 54992683 54993534 ZNF143 GTRD no Epithelial (MCF-7) 108273436
chr17 54992704 54993697 ZNF274 GTRD no Cervix (HeLa-S3) 108273437
chr17 54992725 54993138 ZNF143 GTRD no Epithelial (MCF-7) 108273438
chr17 54992725 54993700 ZNF143 GTRD no Epithelial (MCF-7) 108273439
chr17 54992738 54993487 ZNF143 GTRD no Epithelial (MCF-7) 108273440
chr17 54992738 54993658 ZNF274 GTRD no Blood (GM12878) 108273441
chr17 54992757 54993477 ZNF274 GTRD no Blood (GM12878) 108273443
chr17 54992781 54993597 ZNF143 GTRD no Epithelial (MCF-7) 108273444
chr17 54992800 54993575 ZNF274 GTRD no Liver (HepG2) 108273445
chr17 54992804 54993677 ZBTB33 GTRD no Lung (A549) 108273446
chr17 54992806 54993512 ZNF274 GTRD no Bone Marrow (K562) 108273447
chr17 54992810 54993486 ZNF274 GTRD no Liver (HepG2) 108273448
chr17 54992812 54993640 ZNF274 GTRD no Blood (GM12878) 108273449
chr17 54992820 54993390 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108273450
chr17 54992832 54993579 ZNF143 GTRD no Epithelial (MCF-7) 108273451
chr17 54992848 54993667 ZNF274 GTRD no Bone Marrow (K562) 108273452
chr17 54992884 54993561 ZNF274 GTRD no Blood (GM12878) 108273453
chr17 54992889 54993497 ZNF274 GTRD no Liver (HepG2) 108273454
chr17 54992896 54993519 ZNF274 GTRD no Liver (HepG2) 108273455
chr17 54992904 54993479 ZNF274 GTRD no Blood (GM12878) 108273456
chr17 54992905 54993484 ZNF274 GTRD no Liver (HepG2) 108273457
chr17 54992907 54993594 CTCF GTRD no Spleen 108273458
chr17 54992913 54993490 ZNF274 GTRD no Bone Marrow (K562) 108273459
chr17 54992915 54993571 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108273460
chr17 54992921 54993425 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108273461
chr17 54992936 54993487 ZBTB33 GTRD no Lung (A549) 108273462
chr17 54992938 54993514 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108273463
chr17 54992948 54993464 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108273464
chr17 54992950 54993494 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108273465
chr17 54992951 54993547 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108273466
chr17 54992959 54993489 ZNF143 GTRD no Epithelial (MCF-7) 108273467
chr17 54992959 54993489 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108273468
chr17 54992962 54993484 CTCF GTRD no Kidney 108273469
chr17 54992967 54993475 ZNF274 GTRD no Bone Marrow (K562) 108273470
chr17 54992970 54993591 ZNF274 GTRD no Bone Marrow (K562) 108273471
chr17 54992971 54993434 CTCF GTRD no Lung 108273472
chr17 54992976 54993344 ZNF274 GTRD no Bone Marrow (K562) 108273473
chr17 54992977 54993536 ZNF143 GTRD no Epithelial (MCF-7) 108273474
chr17 54992981 54993506 ZNF274 GTRD no Liver (HepG2) 108273475
chr17 54992987 54993491 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108273476
chr17 54992987 54993563 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108273477
chr17 54992989 54993333 ZNF274 GTRD no Blood (GM12878) 108273478
chr17 54992989 54993805 TEF1 GTRD no Bone (Osteoblast) 108273479
chr17 54992992 54993413 ZNF274 GTRD no Cervix (HeLa-S3) 108273480
chr17 54992994 54993478 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108273481
chr17 54992997 54993576 ZNF274 GTRD no Blood (GM12878) 108273482
chr17 54992999 54993548 ZBTB33 GTRD no Lung (A549) 108273483
chr17 54993014 54993441 ZNF274 GTRD no Cervix (HeLa-S3) 108273484
chr17 54993021 54993421 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108273485
chr17 54993028 54993537 ZNF274 GTRD no Liver (HepG2) 108273486
chr17 54993029 54993385 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108273487
chr17 54993041 54993417 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108273488
chr17 54993044 54993436 STAT1 UCSC Txn Factor no Conserved 108273489
chr17 54993044 54993436 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108273490
chr17 54993049 54993500 ZNF274 GTRD no Bone Marrow (K562) 108273491
chr17 54993051 54993700 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108273492
chr17 54993052 54993387 GATA2 UCSC Txn Factor no Conserved 108273493
chr17 54993054 54993491 STAT3 UCSC Txn Factor no Conserved 108273494
chr17 54993061 54993478 TCF7L2 GTRD no Colon (HCT116) 108273495
chr17 54993063 54993519 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108273496
chr17 54993063 54993564 JUND UCSC Txn Factor no Conserved 108273497
chr17 54993067 54993596 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108273498
chr17 54993079 54993338 ZNF274 GTRD no Bone Marrow (K562) 108273499
chr17 54993080 54993571 ZNF274 GTRD no Bone Marrow (K562) 108273500
chr17 54993087 54993343 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108273501
chr17 54993087 54993473 ZBTB33 GTRD no Brain (SK-N-SH) 108273502
chr17 54993090 54993530 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108273503
Genes associated with rs540164558[chr17:54993095], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More