EnhancerDB
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  3. vista25225[chr17:55434822-55435211]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25225[chr17:55434822-55435211]
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Tissue distribution of vista25225
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Transcription factor that possibly regulate vista25225[chr17:55434822-55435211]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 55435172 55435519 RUNX3 UCSC Txn Factor no Conserved 108273839
chr17 55434823 55434844 ZNF263 JASPAR yes 21259234
chr17 55434823 55434844 ZNF263 JASPAR yes 54945840
chr17 55434827 55434833 SP1 TRANSFAC yes 21259235
chr17 55434827 55434833 SP1 TRANSFAC yes 54945841
chr17 55434827 55434837 SP1 JASPAR yes 21259236
chr17 55434827 55434837 SP1 JASPAR yes 54945842
chr17 55434828 55434839 E2F6 JASPAR yes 21259237
chr17 55434828 55434839 E2F6 JASPAR yes 54945843
chr17 55434828 55434849 ZNF263 JASPAR yes 21259238
chr17 55434828 55434849 ZNF263 JASPAR yes 54945844
chr17 55434829 55434850 ZNF263 JASPAR yes 21259239
chr17 55434829 55434850 ZNF263 JASPAR yes 54945845
chr17 55434842 55434848 NFE2 TRANSFAC yes 21259240
chr17 55434842 55434848 NFE2 TRANSFAC yes 54945846
chr17 55434842 55434854 INSM1 JASPAR yes 21259241
chr17 55434842 55434854 INSM1 JASPAR yes 54945847
chr17 55434857 55434874 BCL6B JASPAR yes 21259242
chr17 55434857 55434874 BCL6B JASPAR yes 54945848
chr17 55434862 55434872 NFIA JASPAR yes 21259243
chr17 55434862 55434872 NFIA JASPAR yes 54945849
chr17 55434863 55434872 NFIX JASPAR yes 21259244
chr17 55434863 55434872 NFIX JASPAR yes 54945850
chr17 55434864 55434870 NFIC JASPAR yes 21259245
chr17 55434864 55434870 NFIC JASPAR yes 54945851
chr17 55434880 55434900 TP63 JASPAR yes 21259246
chr17 55434880 55434900 TP63 JASPAR yes 54945852
chr17 55434882 55434897 TP53 JASPAR yes 21259247
chr17 55434882 55434897 TP53 JASPAR yes 54945853
chr17 55434896 55434900 ESR1 TRANSFAC yes 21259248
chr17 55434896 55434900 ESR1 TRANSFAC yes 54945854
chr17 55434925 55434934 POU3F4 JASPAR yes 21259249
chr17 55434925 55434934 POU5F1B JASPAR yes 21259250
chr17 55434925 55434934 POU3F4 JASPAR yes 54945855
chr17 55434925 55434934 POU5F1B JASPAR yes 54945856
chr17 55434936 55434948 NHLH1 JASPAR yes 21259251
chr17 55434936 55434948 NHLH1 JASPAR yes 54945857
chr17 55434944 55434959 HNF1A JASPAR yes 21259252
chr17 55434944 55434959 HNF1A JASPAR yes 54945858
chr17 55434945 55434958 HNF1B JASPAR yes 21259253
chr17 55434945 55434958 HNF1B JASPAR yes 54945859
chr17 55434946 55434953 NKX3-1 JASPAR yes 21259254
chr17 55434946 55434953 NKX3-1 JASPAR yes 54945860
chr17 55434946 55434958 HNF1B JASPAR yes 21259255
chr17 55434946 55434958 HNF1B JASPAR yes 54945861
chr17 55434951 55434961 HOXC10 JASPAR yes 21259256
chr17 55434951 55434961 HOXD11 JASPAR yes 21259257
chr17 55434951 55434961 HOXC10 JASPAR yes 54945862
chr17 55434951 55434961 HOXD11 JASPAR yes 54945863
chr17 55434954 55434957 MYB TRANSFAC yes 21259258
chr17 55434954 55434957 MYB TRANSFAC yes 54945864
chr17 55434967 55434972 SP1 TRANSFAC yes 21259259
chr17 55434967 55434972 SP1 TRANSFAC yes 54945865
chr17 55434991 55434995 NFE TRANSFAC yes 21259260
chr17 55434991 55434995 NFE TRANSFAC yes 54945866
chr17 55434992 55434997 GATA2 JASPAR yes 21259261
chr17 55434992 55434997 GATA2 JASPAR yes 54945867
chr17 55434998 55435013 RUNX2 JASPAR yes 21259262
chr17 55434998 55435013 RUNX2 JASPAR yes 54945868
chr17 55435001 55435007 SOX10 JASPAR yes 21259263
chr17 55435001 55435007 SOX10 JASPAR yes 54945869
chr17 55435001 55435012 RUNX1 JASPAR yes 21259264
chr17 55435001 55435012 RUNX1 JASPAR yes 54945870
chr17 55435002 55435012 RUNX3 JASPAR yes 21259265
chr17 55435002 55435012 RUNX3 JASPAR yes 54945871
chr17 55435002 55435014 ZBTB7A JASPAR yes 21259266
chr17 55435002 55435014 ZBTB7A JASPAR yes 54945872
chr17 55435003 55435012 RUNX2 JASPAR yes 21259267
chr17 55435003 55435012 RUNX2 JASPAR yes 54945873
chr17 55435010 55435021 SPDEF JASPAR yes 21259268
chr17 55435010 55435021 SPDEF JASPAR yes 54945874
chr17 55435018 55435038 TBX19 JASPAR yes 21259269
chr17 55435018 55435038 TBX19 JASPAR yes 54945875
chr17 55435020 55435036 T JASPAR yes 21259270
chr17 55435020 55435036 T JASPAR yes 54945876
chr17 55435061 55435066 MYC TRANSFAC yes 21259271
chr17 55435061 55435066 MYC TRANSFAC yes 54945877
chr17 55435123 55435129 SOX10 JASPAR yes 21259272
chr17 55435123 55435129 SOX10 JASPAR yes 54945878
chr17 55435134 55435149 FOXA1 JASPAR yes 21259273
chr17 55435134 55435149 FOXA1 JASPAR yes 54945879
chr17 55435140 55435161 IRF1 JASPAR yes 21259274
chr17 55435140 55435161 IRF1 JASPAR yes 54945880
chr17 55435144 55435159 PRDM1 JASPAR yes 21259275
chr17 55435144 55435159 PRDM1 JASPAR yes 54945881
chr17 55435165 55435183 MAFF JASPAR yes 21259276
chr17 55435165 55435183 MAFF JASPAR yes 54945882
chr17 55435166 55435172 HiNF-A TRANSFAC yes 21259277
chr17 55435166 55435172 HiNF-A TRANSFAC yes 54945883
chr17 55435181 55435190 VENTX JASPAR yes 21259278
chr17 55435181 55435190 VENTX JASPAR yes 54945884
chr17 55435192 55435196 YY1 TRANSFAC yes 21259279
chr17 55435192 55435196 YY1 TRANSFAC yes 54945885
SNP sites on vista25225[chr17:55434822-55435211]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 55434873 rs11652270 G A
BCL6B
4948845
chr17 55434955 rs535903812 T TAAC
HNF1A HNF1B HOXC10 HOXD11 MYB
4948846
chr17 55435013 rs792379 C T
RUNX2 SPDEF ZBTB7A
4948847
chr17 55435026 rs144499816 T C
T TBX19
4948848
chr17 55435138 rs533590716 A G
FOXA1
4948849
chr17 55435185 rs79267647 G A
RUNX3 VENTX
4948850
Genes possibly regulated by vista25225[chr17:55434822-55435211]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista25225[chr17:55434822-55435211]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results