EnhancerDB
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  3. rs533590716[chr17:55435138]
Enhancers that have rs533590716[chr17:55435138]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55429945 55439655 enh4485
Prostate (PC-3) Epithelial (MCF-7) Prostate (RWPE1) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Thymus Heart
chr17 55434822 55435211 vista25225
VISTA
Transcript factors that have rs533590716[chr17:55435138]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55432046 55435141 AR GTRD no Prostate (PC-3) 21773315
chr17 55432046 55435141 AR GTRD no Prostate (PC-3) 108273644
chr17 55432046 55435141 AR GTRD no Prostate (PC-3) 108273645
chr17 55432112 55435195 ZBTB33 GTRD no Lung (A549) 108273647
chr17 55432112 55435195 ZBTB33 GTRD no Lung (A549) 108273648
chr17 55432234 55435254 ZBTB33 GTRD no Lung (A549) 108273657
chr17 55432234 55435254 ZBTB33 GTRD no Lung (A549) 108273658
chr17 55432241 55435156 ZBTB33 GTRD no Lung (A549) 108273662
chr17 55432241 55435156 ZBTB33 GTRD no Lung (A549) 108273663
chr17 55432507 55435348 ZNF274 GTRD no Cervix (HeLa-S3) 108273697
chr17 55432507 55435348 ZNF274 GTRD no Cervix (HeLa-S3) 108273698
chr17 55434365 55435835 ZNF274 GTRD no Blood (GM12878) 21773383
chr17 55434365 55435835 ZNF274 GTRD no Blood (GM12878) 108273809
chr17 55434430 55435901 ZNF274 GTRD no Blood (GM12878) 21773384
chr17 55434430 55435901 ZNF274 GTRD no Blood (GM12878) 108273810
chr17 55434453 55435447 ZNF274 GTRD no Blood (GM12878) 21773385
chr17 55434453 55435447 ZNF274 GTRD no Blood (GM12878) 108273811
chr17 55434500 55435239 ZNF274 GTRD no Blood (GM12878) 21773386
chr17 55434500 55435239 ZNF274 GTRD no Blood (GM12878) 108273812
chr17 55434505 55435429 ZNF274 GTRD no Blood (GM12878) 21773387
chr17 55434505 55435429 ZNF274 GTRD no Blood (GM12878) 108273813
chr17 55434533 55435314 ZNF274 GTRD no Bone Marrow (K562) 108273814
chr17 55434594 55435164 ZNF274 GTRD no Blood (GM12878) 21773388
chr17 55434594 55435164 ZNF274 GTRD no Blood (GM12878) 108273815
chr17 55434603 55435147 ZNF274 GTRD no Blood (GM12878) 21773389
chr17 55434603 55435147 ZNF274 GTRD no Blood (GM12878) 108273816
chr17 55434609 55435282 ZNF274 GTRD no Bone Marrow (K562) 108273817
chr17 55434621 55435166 ZNF274 GTRD no Blood (GM12878) 21773391
chr17 55434621 55435166 ZNF274 GTRD no Blood (GM12878) 108273819
chr17 55434625 55435194 ZNF274 GTRD no Blood (GM12878) 21773392
chr17 55434625 55435194 ZNF274 GTRD no Blood (GM12878) 108273820
chr17 55434718 55435308 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21773398
chr17 55434718 55435308 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108273826
chr17 55434775 55435146 ZNF274 GTRD no Blood (GM12878) 21773403
chr17 55434775 55435146 ZNF274 GTRD no Blood (GM12878) 108273832
chr17 55434806 55435186 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21773404
chr17 55434806 55435186 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108273834
chr17 55435065 55435585 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21773407
chr17 55435065 55435585 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108273837
chr17 55435088 55435772 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21773408
chr17 55435088 55435772 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108273838
chr17 55435134 55435149 FOXA1 JASPAR yes 21259273
chr17 55435134 55435149 FOXA1 JASPAR yes 54945879
Genes associated with rs533590716[chr17:55435138], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More