EnhancerDB
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  3. vista25240[chr17:55681566-55681740]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25240[chr17:55681566-55681740]
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Tissue distribution of vista25240
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Transcription factor that possibly regulate vista25240[chr17:55681566-55681740]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 55681456 55681650 RUNX3 UCSC Txn Factor no Conserved 108274210
chr17 55681566 55681587 REST JASPAR yes 21260033
chr17 55681566 55681587 REST JASPAR yes 54974218
chr17 55681578 55681596 ESR1 JASPAR yes 21260034
chr17 55681578 55681596 ESR1 JASPAR yes 54974219
chr17 55681600 55681612 INSM1 JASPAR yes 21260035
chr17 55681600 55681612 INSM1 JASPAR yes 54974220
chr17 55681610 55681624 TLX1 JASPAR yes 21260036
chr17 55681610 55681624 TLX1 JASPAR yes 54974221
chr17 55681611 55681625 TLX1 JASPAR yes 21260037
chr17 55681611 55681625 TLX1 JASPAR yes 54974222
chr17 55681620 55681638 TP73 JASPAR yes 21260038
chr17 55681620 55681638 TP73 JASPAR yes 54974223
chr17 55681640 55681644 NFE TRANSFAC yes 21260039
chr17 55681640 55681644 NFE TRANSFAC yes 54974224
chr17 55681667 55681671 NFE TRANSFAC yes 21260040
chr17 55681667 55681671 NFE TRANSFAC yes 54974225
chr17 55681673 55681691 MAFF JASPAR yes 21260041
chr17 55681673 55681691 MAFF JASPAR yes 54974226
chr17 55681674 55681689 MAFK JASPAR yes 21260042
chr17 55681674 55681689 MAFK JASPAR yes 54974227
chr17 55681684 55681695 STAT1 JASPAR yes 21260043
chr17 55681684 55681695 STAT1 JASPAR yes 54974228
chr17 55681695 55681699 YY1 TRANSFAC yes 21260044
chr17 55681695 55681699 YY1 TRANSFAC yes 54974229
chr17 55681702 55681713 FOXA1 JASPAR yes 21260045
chr17 55681702 55681713 FOXA1 JASPAR yes 54974230
chr17 55681702 55681717 FOXA1 JASPAR yes 21260046
chr17 55681702 55681717 FOXA1 JASPAR yes 54974231
chr17 55681703 55681715 FOXC2 JASPAR yes 21260047
chr17 55681703 55681715 FOXC2 JASPAR yes 54974232
chr17 55681722 55681731 ZEB1 JASPAR yes 21260048
chr17 55681722 55681731 ZEB1 JASPAR yes 54974233
chr17 55681732 55681736 H4TF2 TRANSFAC yes 21260049
chr17 55681732 55681736 H4TF2 TRANSFAC yes 54974234
chr17 55681736 55681747 NRL JASPAR yes 21260050
chr17 55681736 55681747 NRL JASPAR yes 54974235
SNP sites on vista25240[chr17:55681566-55681740]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 55681602 rs72834922 G A
INSM1 RUNX3
4951623
chr17 55681653 rs145102384 T C no 4951624
chr17 55681673 rs117104479 G A
MAFF
4951625
Genes possibly regulated by vista25240[chr17:55681566-55681740]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista25240[chr17:55681566-55681740]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results