EnhancerDB
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  3. rs117104479[chr17:55681673]
Enhancers that have rs117104479[chr17:55681673]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55673238 55692440 enh4492
Colon (HCT116) Adrenal Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Breast Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr17 55681566 55681740 vista25240
VISTA
Transcript factors that have rs117104479[chr17:55681673]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55681673 55681691 MAFF JASPAR yes 21260041
chr17 55681673 55681691 MAFF JASPAR yes 54974226
Genes associated with rs117104479[chr17:55681673], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 56080721 56084707 - SRSF1 ENSG00000136450.8 56084707 399048 Breast 0.364732 16078