EnhancerDB
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  3. vista25251[chr17:55839297-55839567]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25251[chr17:55839297-55839567]
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Tissue distribution of vista25251
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Transcription factor that possibly regulate vista25251[chr17:55839297-55839567]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 55839264 55839548 USF1 UCSC Txn Factor no Conserved 108274387
chr17 55839289 55839305 SRF JASPAR yes 21260548
chr17 55839289 55839305 SRF JASPAR yes 54987437
chr17 55839289 55839307 SRF JASPAR yes 21260549
chr17 55839289 55839307 SRF JASPAR yes 54987438
chr17 55839300 55839304 LFA1 TRANSFAC yes 21260550
chr17 55839300 55839304 LFA1 TRANSFAC yes 54987439
chr17 55839314 55839329 STAT1 JASPAR yes 21260551
chr17 55839314 55839329 STAT1 JASPAR yes 54987440
chr17 55839316 55839327 STAT3 JASPAR yes 21260552
chr17 55839316 55839327 STAT3 JASPAR yes 54987441
chr17 55839321 55839328 NFATC2 JASPAR yes 21260553
chr17 55839321 55839328 NFATC2 JASPAR yes 54987442
chr17 55839363 55839368 SP1 TRANSFAC yes 21260554
chr17 55839363 55839368 SP1 TRANSFAC yes 54987443
chr17 55839385 55839400 HNF4G JASPAR yes 21260555
chr17 55839385 55839400 HNF4G JASPAR yes 54987444
chr17 55839386 55839400 NR2F1 JASPAR yes 21260556
chr17 55839386 55839400 NR2F1 JASPAR yes 54987445
chr17 55839386 55839401 HNF4A JASPAR yes 21260557
chr17 55839386 55839401 HNF4A JASPAR yes 54987446
chr17 55839391 55839404 NR2F1 JASPAR yes 21260558
chr17 55839391 55839404 NR2F1 JASPAR yes 54987447
chr17 55839392 55839410 ESR2 JASPAR yes 21260559
chr17 55839392 55839410 ESR2 JASPAR yes 54987448
chr17 55839393 55839401 NR4A2 JASPAR yes 21260560
chr17 55839393 55839401 NR4A2 JASPAR yes 54987449
chr17 55839393 55839410 ESR1 JASPAR yes 21260561
chr17 55839393 55839410 ESR1 JASPAR yes 54987450
chr17 55839394 55839409 ESR2 JASPAR yes 21260562
chr17 55839394 55839409 ESR2 JASPAR yes 54987451
chr17 55839394 55839414 ESR1 JASPAR yes 21260563
chr17 55839394 55839414 ESR1 JASPAR yes 54987452
chr17 55839395 55839399 ESR1 TRANSFAC yes 21260564
chr17 55839395 55839399 ESR1 TRANSFAC yes 54987453
chr17 55839395 55839405 MAX JASPAR yes 21260565
chr17 55839395 55839405 MAX JASPAR yes 54987454
chr17 55839395 55839406 USF1 JASPAR yes 21260566
chr17 55839395 55839406 USF2 JASPAR yes 21260567
chr17 55839395 55839406 USF1 JASPAR yes 54987455
chr17 55839395 55839406 USF2 JASPAR yes 54987456
chr17 55839396 55839406 BHLHE40 JASPAR yes 21260568
chr17 55839396 55839406 HEY1 JASPAR yes 21260569
chr17 55839396 55839406 MAX JASPAR yes 21260570
chr17 55839396 55839406 MNT JASPAR yes 21260571
chr17 55839396 55839406 SREBF2 JASPAR yes 21260572
chr17 55839396 55839406 TFE3 JASPAR yes 21260573
chr17 55839396 55839406 TFEB JASPAR yes 21260574
chr17 55839396 55839406 TFEC JASPAR yes 21260575
chr17 55839396 55839406 BHLHE40 JASPAR yes 54987457
chr17 55839396 55839406 HEY1 JASPAR yes 54987458
chr17 55839396 55839406 MAX JASPAR yes 54987459
chr17 55839396 55839406 MNT JASPAR yes 54987460
chr17 55839396 55839406 SREBF2 JASPAR yes 54987461
chr17 55839396 55839406 TFE3 JASPAR yes 54987462
chr17 55839396 55839406 TFEB JASPAR yes 54987463
chr17 55839396 55839406 TFEC JASPAR yes 54987464
chr17 55839396 55839407 USF2 JASPAR yes 21260576
chr17 55839396 55839407 USF2 JASPAR yes 54987465
chr17 55839397 55839407 MAX JASPAR yes 21260577
chr17 55839397 55839407 MAX JASPAR yes 54987466
chr17 55839398 55839403 MYC TRANSFAC yes 21260578
chr17 55839398 55839403 USF1 TRANSFAC yes 21260579
chr17 55839398 55839403 USF2 TRANSFAC yes 21260580
chr17 55839398 55839403 MYC TRANSFAC yes 54987467
chr17 55839398 55839403 USF1 TRANSFAC yes 54987468
chr17 55839398 55839403 USF2 TRANSFAC yes 54987469
chr17 55839398 55839405 USF1 JASPAR yes 21260581
chr17 55839398 55839405 USF1 JASPAR yes 54987470
chr17 55839404 55839416 INSM1 JASPAR yes 21260582
chr17 55839404 55839416 INSM1 JASPAR yes 54987471
chr17 55839415 55839418 MYB TRANSFAC yes 21260583
chr17 55839415 55839418 MYB TRANSFAC yes 54987472
chr17 55839447 55839459 FOXI1 JASPAR yes 21260584
chr17 55839447 55839459 FOXI1 JASPAR yes 54987473
chr17 55839457 55839472 RUNX2 JASPAR yes 21260585
chr17 55839457 55839472 RUNX2 JASPAR yes 54987474
chr17 55839458 55839467 RUNX2 JASPAR yes 21260586
chr17 55839458 55839467 RUNX2 JASPAR yes 54987475
chr17 55839458 55839468 RUNX3 JASPAR yes 21260587
chr17 55839458 55839468 RUNX3 JASPAR yes 54987476
chr17 55839458 55839469 RUNX1 JASPAR yes 21260588
chr17 55839458 55839469 RUNX1 JASPAR yes 54987477
chr17 55839458 55839473 SCRT1 JASPAR yes 21260589
chr17 55839458 55839473 SCRT1 JASPAR yes 54987478
chr17 55839467 55839477 RELA JASPAR yes 21260590
chr17 55839467 55839477 RELA JASPAR yes 54987479
chr17 55839481 55839491 SP1 JASPAR yes 21260591
chr17 55839481 55839491 SP1 JASPAR yes 54987480
chr17 55839490 55839503 TFAP2A JASPAR yes 21260592
chr17 55839490 55839503 TFAP2B JASPAR yes 21260593
chr17 55839490 55839503 TFAP2C JASPAR yes 21260594
chr17 55839490 55839503 TFAP2A JASPAR yes 54987481
chr17 55839490 55839503 TFAP2B JASPAR yes 54987482
chr17 55839490 55839503 TFAP2C JASPAR yes 54987483
chr17 55839497 55839507 SP1 JASPAR yes 21260595
chr17 55839497 55839507 SP1 JASPAR yes 54987484
chr17 55839499 55839505 MAZ TRANSFAC yes 21260596
chr17 55839499 55839505 MAZ TRANSFAC yes 54987485
chr17 55839504 55839508 LFA1 TRANSFAC yes 21260597
chr17 55839504 55839508 LFA1 TRANSFAC yes 54987486
chr17 55839521 55839542 ZNF263 JASPAR yes 21260598
chr17 55839521 55839542 ZNF263 JASPAR yes 54987487
chr17 55839524 55839545 ZNF263 JASPAR yes 21260599
chr17 55839524 55839545 ZNF263 JASPAR yes 54987488
chr17 55839529 55839549 RREB1 JASPAR yes 21260600
chr17 55839529 55839549 RREB1 JASPAR yes 54987489
chr17 55839530 55839550 RREB1 JASPAR yes 21260601
chr17 55839530 55839550 RREB1 JASPAR yes 54987490
chr17 55839538 55839550 INSM1 JASPAR yes 21260602
chr17 55839538 55839550 INSM1 JASPAR yes 54987491
chr17 55839538 55839552 PLAG1 JASPAR yes 21260603
chr17 55839538 55839552 PLAG1 JASPAR yes 54987492
chr17 55839542 55839550 SP1 TRANSFAC yes 21260604
chr17 55839542 55839550 SP1 TRANSFAC yes 54987493
chr17 55839542 55839552 SP1 JASPAR yes 21260605
chr17 55839542 55839552 SP1 JASPAR yes 54987494
chr17 55839546 55839556 ZNF740 JASPAR yes 21260606
chr17 55839546 55839556 ZNF740 JASPAR yes 54987495
chr17 55839546 55839560 GLIS2 JASPAR yes 21260607
chr17 55839546 55839560 GLIS2 JASPAR yes 54987496
chr17 55839562 55839568 ZNF354C JASPAR yes 21260608
chr17 55839562 55839568 ZNF354C JASPAR yes 54987497
SNP sites on vista25251[chr17:55839297-55839567]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 55839301 rs141952058 G A
LFA1 SRF USF1
4953036
chr17 55839336 rs8068262 G A
USF1
4953037
chr17 55839349 rs6503833 T C
USF1
4953038
chr17 55839367 rs190329713 G T
SP1 USF1
4953039
chr17 55839402 rs117949555 G A,T
BHLHE40 ESR1 ESR2 HEY1 MAX MNT MYC NR2F1 SREBF2 TFE3 TFEB TFEC USF1 USF2
4953040
chr17 55839507 rs181881803 G A
LFA1 SP1 USF1
4953041
chr17 55839552 rs567016849 C G
GLIS2 PLAG1 SP1 ZNF740
4953042
Genes possibly regulated by vista25251[chr17:55839297-55839567]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 55821842 55822673 - AC007431.1 ENSG00000166329.2 55822673 0.96 0.0 16073 83376
chr17 55916842 55927417 - MRPS23 ENSG00000181610.8 55927417 0.7 0.99 16074 12150
Expression level of Genes
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miRNAs possibly regulated by vista25251[chr17:55839297-55839567]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results