EnhancerDB
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  3. rs117949555[chr17:55839402]
Enhancers that have rs117949555[chr17:55839402]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55837827 55841977 enh69302
Neural Stem Cells (H9)
chr17 55839297 55839567 vista25251
VISTA
Transcript factors that have rs117949555[chr17:55839402]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55839202 55839592 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108274384
chr17 55839224 55839560 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108274385
chr17 55839259 55839535 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108274386
chr17 55839264 55839548 USF1 UCSC Txn Factor no Conserved 108274387
chr17 55839284 55839554 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108274388
chr17 55839285 55839549 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108274389
chr17 55839295 55839525 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108274390
chr17 55839302 55839503 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108274391
chr17 55839322 55839471 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108274392
chr17 55839332 55839442 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108274393
chr17 55839369 55839599 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108274394
chr17 55839391 55839404 NR2F1 JASPAR yes 21260558
chr17 55839391 55839404 NR2F1 JASPAR yes 54987447
chr17 55839392 55839410 ESR2 JASPAR yes 21260559
chr17 55839392 55839410 ESR2 JASPAR yes 54987448
chr17 55839393 55839410 ESR1 JASPAR yes 21260561
chr17 55839393 55839410 ESR1 JASPAR yes 54987450
chr17 55839394 55839409 ESR2 JASPAR yes 21260562
chr17 55839394 55839409 ESR2 JASPAR yes 54987451
chr17 55839394 55839414 ESR1 JASPAR yes 21260563
chr17 55839394 55839414 ESR1 JASPAR yes 54987452
chr17 55839395 55839405 MAX JASPAR yes 21260565
chr17 55839395 55839405 MAX JASPAR yes 54987454
chr17 55839395 55839406 USF1 JASPAR yes 21260566
chr17 55839395 55839406 USF2 JASPAR yes 21260567
chr17 55839395 55839406 USF1 JASPAR yes 54987455
chr17 55839395 55839406 USF2 JASPAR yes 54987456
chr17 55839396 55839406 BHLHE40 JASPAR yes 21260568
chr17 55839396 55839406 HEY1 JASPAR yes 21260569
chr17 55839396 55839406 MAX JASPAR yes 21260570
chr17 55839396 55839406 MNT JASPAR yes 21260571
chr17 55839396 55839406 SREBF2 JASPAR yes 21260572
chr17 55839396 55839406 TFE3 JASPAR yes 21260573
chr17 55839396 55839406 TFEB JASPAR yes 21260574
chr17 55839396 55839406 TFEC JASPAR yes 21260575
chr17 55839396 55839406 BHLHE40 JASPAR yes 54987457
chr17 55839396 55839406 HEY1 JASPAR yes 54987458
chr17 55839396 55839406 MAX JASPAR yes 54987459
chr17 55839396 55839406 MNT JASPAR yes 54987460
chr17 55839396 55839406 SREBF2 JASPAR yes 54987461
chr17 55839396 55839406 TFE3 JASPAR yes 54987462
chr17 55839396 55839406 TFEB JASPAR yes 54987463
chr17 55839396 55839406 TFEC JASPAR yes 54987464
chr17 55839396 55839407 USF2 JASPAR yes 21260576
chr17 55839396 55839407 USF2 JASPAR yes 54987465
chr17 55839397 55839407 MAX JASPAR yes 21260577
chr17 55839397 55839407 MAX JASPAR yes 54987466
chr17 55839398 55839403 MYC TRANSFAC yes 21260578
chr17 55839398 55839403 USF1 TRANSFAC yes 21260579
chr17 55839398 55839403 USF2 TRANSFAC yes 21260580
chr17 55839398 55839403 MYC TRANSFAC yes 54987467
chr17 55839398 55839403 USF1 TRANSFAC yes 54987468
chr17 55839398 55839403 USF2 TRANSFAC yes 54987469
chr17 55839398 55839405 USF1 JASPAR yes 21260581
chr17 55839398 55839405 USF1 JASPAR yes 54987470
Genes associated with rs117949555[chr17:55839402], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More