EnhancerDB
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  3. vista25259[chr17:55970352-55970806]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25259[chr17:55970352-55970806]
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Tissue distribution of vista25259
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Transcription factor that possibly regulate vista25259[chr17:55970352-55970806]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 55970300 55970627 CEBPB UCSC Txn Factor no Conserved 108274649
chr17 55970368 55970608 USF1 UCSC Txn Factor no Conserved 108274660
chr17 55970373 55970385 HES5 JASPAR yes 21260945
chr17 55970373 55970385 HES5 JASPAR yes 54995793
chr17 55970383 55970404 IRF1 JASPAR yes 21260946
chr17 55970383 55970404 IRF1 JASPAR yes 54995794
chr17 55970392 55970396 YY1 TRANSFAC yes 21260947
chr17 55970392 55970396 YY1 TRANSFAC yes 54995795
chr17 55970392 55970402 ERF JASPAR yes 21260948
chr17 55970392 55970402 ERF JASPAR yes 54995796
chr17 55970393 55970401 FEV JASPAR yes 21260949
chr17 55970393 55970401 FEV JASPAR yes 54995797
chr17 55970405 55970425 ESR1 JASPAR yes 21260950
chr17 55970405 55970425 ESR1 JASPAR yes 54995798
chr17 55970413 55970431 ESR1 JASPAR yes 21260951
chr17 55970413 55970431 ESR1 JASPAR yes 54995799
chr17 55970414 55970434 ESR1 JASPAR yes 21260952
chr17 55970414 55970434 ESR1 JASPAR yes 54995800
chr17 55970415 55970435 ESR1 JASPAR yes 21260953
chr17 55970415 55970435 ESR1 JASPAR yes 54995801
chr17 55970428 55970432 NFE TRANSFAC yes 21260954
chr17 55970428 55970432 NFE TRANSFAC yes 54995802
chr17 55970463 55970468 SP1 TRANSFAC yes 21260955
chr17 55970463 55970468 SP1 TRANSFAC yes 54995803
chr17 55970464 55970481 RARA JASPAR yes 21260956
chr17 55970464 55970481 RARA JASPAR yes 54995804
chr17 55970468 55970483 JUND JASPAR yes 21260957
chr17 55970468 55970483 JUND JASPAR yes 54995805
chr17 55970469 55970482 JUN JASPAR yes 21260958
chr17 55970469 55970482 JUN JASPAR yes 54995806
chr17 55970470 55970484 ATF7 JASPAR yes 21260959
chr17 55970470 55970484 ATF7 JASPAR yes 54995807
chr17 55970471 55970481 RORA JASPAR yes 21260960
chr17 55970471 55970481 RORA JASPAR yes 54995808
chr17 55970471 55970483 JDP2 JASPAR yes 21260961
chr17 55970471 55970483 JDP2 JASPAR yes 54995809
chr17 55970471 55970486 JUND JASPAR yes 21260962
chr17 55970471 55970486 JUND JASPAR yes 54995810
chr17 55970471 55970491 PPARG JASPAR yes 21260963
chr17 55970471 55970491 PPARG JASPAR yes 54995811
chr17 55970472 55970485 JUN JASPAR yes 21260964
chr17 55970472 55970485 NR2F1 JASPAR yes 21260965
chr17 55970472 55970485 JUN JASPAR yes 54995812
chr17 55970472 55970485 NR2F1 JASPAR yes 54995813
chr17 55970473 55970481 CREB1 JASPAR yes 21260966
chr17 55970473 55970481 CREB1 JASPAR yes 54995814
chr17 55970473 55970491 ESR2 JASPAR yes 21260967
chr17 55970473 55970491 ESR2 JASPAR yes 54995815
chr17 55970475 55970490 ESR2 JASPAR yes 21260968
chr17 55970475 55970490 ESR2 JASPAR yes 54995816
chr17 55970476 55970480 ESR1 TRANSFAC yes 21260969
chr17 55970476 55970480 ESR1 TRANSFAC yes 54995817
chr17 55970476 55970487 USF1 JASPAR yes 21260970
chr17 55970476 55970487 USF1 JASPAR yes 54995818
chr17 55970477 55970487 TFEB JASPAR yes 21260971
chr17 55970477 55970487 TFEB JASPAR yes 54995819
chr17 55970477 55970488 USF1 JASPAR yes 21260972
chr17 55970477 55970488 USF1 JASPAR yes 54995820
chr17 55970479 55970492 NR2F1 JASPAR yes 21260973
chr17 55970479 55970492 NR2F1 JASPAR yes 54995821
chr17 55970481 55970492 ESRRA JASPAR yes 21260974
chr17 55970481 55970492 ESRRB JASPAR yes 21260975
chr17 55970481 55970492 ESRRA JASPAR yes 54995822
chr17 55970481 55970492 ESRRB JASPAR yes 54995823
chr17 55970495 55970507 HLF JASPAR yes 21260976
chr17 55970495 55970507 HLF JASPAR yes 54995824
chr17 55970497 55970505 NF-IL6 TRANSFAC yes 21260977
chr17 55970497 55970505 NF-IL6 TRANSFAC yes 54995825
chr17 55970502 55970505 MYB TRANSFAC yes 21260978
chr17 55970502 55970505 MYB TRANSFAC yes 54995826
chr17 55970521 55970527 ETS1 JASPAR yes 21260979
chr17 55970521 55970527 ETS1 JASPAR yes 54995827
chr17 55970528 55970537 NKX2-8 JASPAR yes 21260980
chr17 55970528 55970537 NKX2-8 JASPAR yes 54995828
chr17 55970528 55970538 NKX2-3 JASPAR yes 21260981
chr17 55970528 55970538 NKX2-3 JASPAR yes 54995829
chr17 55970561 55970565 LFA1 TRANSFAC yes 21260982
chr17 55970561 55970565 LFA1 TRANSFAC yes 54995830
chr17 55970561 55970573 NHLH1 JASPAR yes 21260983
chr17 55970561 55970573 NHLH1 JASPAR yes 54995831
chr17 55970562 55970572 NHLH1 JASPAR yes 21260984
chr17 55970562 55970572 NHLH1 JASPAR yes 54995832
chr17 55970579 55970583 H1TF2 TRANSFAC yes 21260985
chr17 55970579 55970583 NFE TRANSFAC yes 21260986
chr17 55970579 55970583 SRF TRANSFAC yes 21260987
chr17 55970579 55970583 H1TF2 TRANSFAC yes 54995833
chr17 55970579 55970583 NFE TRANSFAC yes 54995834
chr17 55970579 55970583 SRF TRANSFAC yes 54995835
chr17 55970585 55970595 SREBF1 JASPAR yes 21260988
chr17 55970585 55970595 SREBF2 JASPAR yes 21260989
chr17 55970585 55970595 SREBF1 JASPAR yes 54995836
chr17 55970585 55970595 SREBF2 JASPAR yes 54995837
chr17 55970599 55970604 SP1 TRANSFAC yes 21260990
chr17 55970599 55970604 SP1 TRANSFAC yes 54995838
chr17 55970658 55970673 PRDM1 JASPAR yes 21260991
chr17 55970658 55970673 PRDM1 JASPAR yes 54995839
chr17 55970659 55970680 ZNF263 JASPAR yes 21260992
chr17 55970659 55970680 ZNF263 JASPAR yes 54995840
chr17 55970661 55970678 RXRA JASPAR yes 21260993
chr17 55970661 55970678 RXRA JASPAR yes 54995841
chr17 55970661 55970682 ZNF263 JASPAR yes 21260994
chr17 55970661 55970682 ZNF263 JASPAR yes 54995842
chr17 55970662 55970683 ZNF263 JASPAR yes 21260995
chr17 55970662 55970683 ZNF263 JASPAR yes 54995843
chr17 55970666 55970687 ZNF263 JASPAR yes 21260996
chr17 55970666 55970687 ZNF263 JASPAR yes 54995844
chr17 55970667 55970672 ETS2 TRANSFAC yes 21260997
chr17 55970667 55970672 ETS2 TRANSFAC yes 54995845
chr17 55970667 55970675 EHF JASPAR yes 21260998
chr17 55970667 55970675 EHF JASPAR yes 54995846
chr17 55970667 55970688 ZNF263 JASPAR yes 21260999
chr17 55970667 55970688 ZNF263 JASPAR yes 54995847
chr17 55970673 55970678 ETS2 TRANSFAC yes 21261000
chr17 55970673 55970678 ETS2 TRANSFAC yes 54995848
chr17 55970674 55970695 ZNF263 JASPAR yes 21261001
chr17 55970674 55970695 ZNF263 JASPAR yes 54995849
chr17 55970706 55970726 RREB1 JASPAR yes 21261002
chr17 55970706 55970726 RREB1 JASPAR yes 54995850
chr17 55970710 55970730 RREB1 JASPAR yes 21261003
chr17 55970710 55970730 RREB1 JASPAR yes 54995851
chr17 55970712 55970732 RREB1 JASPAR yes 21261004
chr17 55970712 55970732 RREB1 JASPAR yes 54995852
chr17 55970714 55970734 RREB1 JASPAR yes 21261005
chr17 55970714 55970734 RREB1 JASPAR yes 54995853
chr17 55970716 55970736 RREB1 JASPAR yes 21261006
chr17 55970716 55970736 RREB1 JASPAR yes 54995854
chr17 55970751 55970763 PROX1 JASPAR yes 21261007
chr17 55970751 55970763 PROX1 JASPAR yes 54995855
chr17 55970758 55970776 RARA JASPAR yes 21261008
chr17 55970758 55970776 RARA JASPAR yes 54995856
chr17 55970768 55970774 NFE2 TRANSFAC yes 21261009
chr17 55970768 55970774 NFE2 TRANSFAC yes 54995857
chr17 55970775 55970781 TCF4 TRANSFAC yes 21261010
chr17 55970775 55970781 TCF4 TRANSFAC yes 54995858
chr17 55970783 55970794 FOXP2 JASPAR yes 21261011
chr17 55970783 55970794 FOXP2 JASPAR yes 54995859
chr17 55970799 55970811 MEF2B JASPAR yes 21261012
chr17 55970799 55970811 MEF2B JASPAR yes 54995860
SNP sites on vista25259[chr17:55970352-55970806]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 55970401 rs73314225 G A
CEBPB ERF FEV IRF1 USF1
4954069
chr17 55970413 rs149433298 G A
CEBPB ESR1 USF1
4954070
chr17 55970630 rs188953255 C T no 4954071
chr17 55970710 rs147335365 A ATG,ATGTG
RREB1
4954072
chr17 55970710 rs397762963 A ATG
RREB1
4954073
Genes possibly regulated by vista25259[chr17:55970352-55970806]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 55916842 55927417 - MRPS23 ENSG00000181610.8 55927417 0.7 0.99 16074 57065
chr17 55938604 56032684 - CUEDC1 ENSG00000180891.8 56032684 0.72 1.0 16075 38122
chr17 56048910 56065620 - VEZF1 ENSG00000136451.4 56065620 0.72 1.0 16076 5186
Expression level of Genes
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miRNAs possibly regulated by vista25259[chr17:55970352-55970806]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results