EnhancerDB
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  3. rs188953255[chr17:55970630]
Enhancers that have rs188953255[chr17:55970630]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55962618 55979623 enh17245
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Lung Blood (GM12878) Stomach Placenta Colon (HCT116) Uterus Thyroid Adrenal Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Heart
chr17 55970352 55970806 vista25259
VISTA
Transcript factors that have rs188953255[chr17:55970630]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55969985 55970641 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108274636
chr17 55969985 55970641 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108274637
chr17 55970118 55970694 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108274639
chr17 55970132 55970732 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108274640
chr17 55970134 55970674 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108274641
chr17 55970145 55970815 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108274642
chr17 55970183 55970727 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21773800
chr17 55970183 55970727 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108274644
chr17 55970195 55970811 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21773801
chr17 55970195 55970811 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108274645
chr17 55970260 55970796 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108274647
chr17 55970265 55970655 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21773802
chr17 55970265 55970655 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108274648
chr17 55970335 55970691 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21773803
chr17 55970335 55970691 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108274650
chr17 55970341 55970631 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21773805
chr17 55970341 55970631 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108274652
chr17 55970344 55970634 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21773806
chr17 55970344 55970634 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108274653
chr17 55970363 55970647 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21773811
chr17 55970363 55970647 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108274659
chr17 55970370 55970826 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21773813
chr17 55970370 55970826 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108274663
chr17 55970376 55970752 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21773814
chr17 55970376 55970752 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108274664
chr17 55970388 55970698 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21773816
chr17 55970388 55970698 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108274666
chr17 55970390 55970700 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108274667
chr17 55970392 55970752 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21773818
chr17 55970392 55970752 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108274669
chr17 55970395 55970644 ZNF274 GTRD no Liver (HepG2) 21773819
chr17 55970395 55970644 ZNF274 GTRD no Liver (HepG2) 108274670
chr17 55970397 55970713 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21773820
chr17 55970397 55970713 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108274671
chr17 55970408 55970664 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21773821
chr17 55970408 55970664 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108274672
chr17 55970501 55970639 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21773823
chr17 55970501 55970639 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108274675
chr17 55970627 55971003 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21773824
chr17 55970627 55971003 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108274676
Genes associated with rs188953255[chr17:55970630], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More