EnhancerDB
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  3. vista25285[chr17:56410599-56410851]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25285[chr17:56410599-56410851]
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Tissue distribution of vista25285
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Transcription factor that possibly regulate vista25285[chr17:56410599-56410851]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 56399196 56418052 POLR2A UCSC Txn Factor no Conserved 108275032
chr17 56399196 56418052 POLR2A UCSC Txn Factor no Conserved 108275033
chr17 56399196 56418052 POLR2A UCSC Txn Factor no Conserved 108275034
chr17 56399196 56418052 POLR2A UCSC Txn Factor no Conserved 108275035
chr17 56399196 56418052 POLR2A UCSC Txn Factor no Conserved 108275036
chr17 56399196 56418052 POLR2A UCSC Txn Factor no Conserved 108275037
chr17 56410543 56410840 RUNX3 UCSC Txn Factor no Conserved 108275045
chr17 56410570 56410805 EBF1 UCSC Txn Factor no Conserved 108275051
chr17 56410620 56410641 ZNF263 JASPAR yes 21262313
chr17 56410624 56410638 E2F7 JASPAR yes 21262314
chr17 56410625 56410637 E2F8 JASPAR yes 21262315
chr17 56410626 56410637 E2F1 JASPAR yes 21262316
chr17 56410627 56410638 E2F4 JASPAR yes 21262317
chr17 56410627 56410638 E2F6 JASPAR yes 21262318
chr17 56410628 56410633 SP1 TRANSFAC yes 21262319
chr17 56410629 56410637 E2F1 JASPAR yes 21262320
chr17 56410642 56410653 E2F6 JASPAR yes 21262321
chr17 56410646 56410651 ETS2 TRANSFAC yes 21262322
chr17 56410647 56410662 HSF1 JASPAR yes 21262323
chr17 56410648 56410661 HSF1 JASPAR yes 21262324
chr17 56410648 56410661 HSF4 JASPAR yes 21262325
chr17 56410663 56410674 ETV2 JASPAR yes 21262326
chr17 56410663 56410674 SPDEF JASPAR yes 21262327
chr17 56410664 56410673 ELK4 JASPAR yes 21262328
chr17 56410664 56410674 ELK1 JASPAR yes 21262329
chr17 56410664 56410674 ELK3 JASPAR yes 21262330
chr17 56410664 56410674 ERF JASPAR yes 21262331
chr17 56410664 56410674 ERG JASPAR yes 21262332
chr17 56410664 56410674 ETS1 JASPAR yes 21262333
chr17 56410664 56410674 ETV1 JASPAR yes 21262334
chr17 56410664 56410674 ETV3 JASPAR yes 21262335
chr17 56410664 56410674 ETV4 JASPAR yes 21262336
chr17 56410664 56410674 ETV5 JASPAR yes 21262337
chr17 56410664 56410674 FEV JASPAR yes 21262338
chr17 56410664 56410674 FLI1 JASPAR yes 21262339
chr17 56410664 56410675 FLI1 JASPAR yes 21262340
chr17 56410670 56410679 HIC2 JASPAR yes 21262341
chr17 56410673 56410677 LFA1 TRANSFAC yes 21262342
chr17 56410678 56410696 ESR1 JASPAR yes 21262343
chr17 56410679 56410684 SP1 TRANSFAC yes 21262344
chr17 56410679 56410691 ZBTB7A JASPAR yes 21262345
chr17 56410686 56410695 ZEB1 JASPAR yes 21262346
chr17 56410687 56410697 TCF3 JASPAR yes 21262347
chr17 56410687 56410697 TCF4 JASPAR yes 21262348
chr17 56410688 56410697 SNAI2 JASPAR yes 21262349
chr17 56410689 56410694 USF2 TRANSFAC yes 21262350
chr17 56410698 56410710 ZBTB7C JASPAR yes 21262351
chr17 56410707 56410712 H4TF1 TRANSFAC yes 21262352
chr17 56410707 56410718 CEBPB JASPAR yes 21262353
chr17 56410710 56410724 EBF1 JASPAR yes 21262354
chr17 56410711 56410717 MZF1 JASPAR yes 21262355
chr17 56410711 56410722 EBF1 JASPAR yes 21262356
chr17 56410712 56410723 EBF1 JASPAR yes 21262357
chr17 56410717 56410722 TFAP2A TRANSFAC yes 21262358
chr17 56410717 56410723 MZF1 JASPAR yes 21262359
chr17 56410719 56410724 ETS2 TRANSFAC yes 21262360
chr17 56410722 56410735 ELF1 JASPAR yes 21262361
chr17 56410725 56410736 ELK4 JASPAR yes 21262362
chr17 56410725 56410736 FLI1 JASPAR yes 21262363
chr17 56410738 56410752 PLAG1 JASPAR yes 21262364
chr17 56410740 56410749 TFAP2A JASPAR yes 21262365
chr17 56410752 56410764 INSM1 JASPAR yes 21262366
chr17 56410757 56410766 SP1 TRANSFAC yes 21262367
chr17 56410757 56410767 SP1 JASPAR yes 21262368
chr17 56410757 56410778 ZNF263 JASPAR yes 21262369
chr17 56410758 56410767 SP1 TRANSFAC yes 21262370
chr17 56410759 56410765 MAZ TRANSFAC yes 21262371
chr17 56410759 56410779 RREB1 JASPAR yes 21262372
chr17 56410762 56410783 ZNF263 JASPAR yes 21262373
chr17 56410764 56410784 RREB1 JASPAR yes 21262374
chr17 56410765 56410786 ZNF263 JASPAR yes 21262375
chr17 56410772 56410792 RREB1 JASPAR yes 21262376
chr17 56410773 56410783 ZNF740 JASPAR yes 21262377
chr17 56410775 56410785 ZNF740 JASPAR yes 21262378
chr17 56410780 56410785 SP1 TRANSFAC yes 21262379
chr17 56410781 56410791 SP1 JASPAR yes 21262380
chr17 56410783 56410787 LFA1 TRANSFAC yes 21262381
chr17 56410807 56410824 ZNF410 JASPAR yes 21262382
SNP sites on vista25285[chr17:56410599-56410851]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 56410605 rs374412926 G A
EBF1 POLR2A RUNX3
4955946
chr17 56410615 rs76911125 G A
EBF1 POLR2A RUNX3
4955947
chr17 56410752 rs542226034 C T
EBF1 INSM1 PLAG1 POLR2A RUNX3
4955948
chr17 56410833 rs28540143 C A,T
POLR2A RUNX3
4955949
Genes possibly regulated by vista25285[chr17:56410599-56410851]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 56347217 56358296 - MPO ENSG00000005381.6 56358296 0.93 1.0 16085 47697
chr17 56378592 56406152 - BZRAP1 ENSG00000005379.11 56406152 0.77 0.93 16086 95553
chr17 56422539 56430454 - SUPT4H1 ENSG00000213246.2 56430454 0.63 0.99 16087 80397
chr17 56429861 56494956 - RNF43 ENSG00000108375.8 56494956 0.74 1.0 16088 15895
Expression level of Genes
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miRNAs possibly regulated by vista25285[chr17:56410599-56410851]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results