EnhancerDB
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  3. rs28540143[chr17:56410833]
Enhancers that have rs28540143[chr17:56410833]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 56410599 56410851 vista25285
VISTA
Transcript factors that have rs28540143[chr17:56410833]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 56399196 56418052 POLR2A UCSC Txn Factor no Conserved 108275032
chr17 56399196 56418052 POLR2A UCSC Txn Factor no Conserved 108275033
chr17 56399196 56418052 POLR2A UCSC Txn Factor no Conserved 108275034
chr17 56399196 56418052 POLR2A UCSC Txn Factor no Conserved 108275035
chr17 56399196 56418052 POLR2A UCSC Txn Factor no Conserved 108275036
chr17 56399196 56418052 POLR2A UCSC Txn Factor no Conserved 108275037
chr17 56410491 56410901 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21773992
chr17 56410491 56410901 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108275041
chr17 56410514 56410870 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21773993
chr17 56410514 56410870 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108275043
chr17 56410543 56410840 RUNX3 UCSC Txn Factor no Conserved 108275045
chr17 56410543 56410840 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108275046
chr17 56410544 56410924 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21773994
chr17 56410544 56410924 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108275047
chr17 56410548 56410868 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21773995
chr17 56410548 56410868 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108275048
chr17 56410563 56410947 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21773996
chr17 56410563 56410947 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108275050
Genes associated with rs28540143[chr17:56410833], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More