EnhancerDB
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  3. vista25288[chr17:56413212-56413667]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25288[chr17:56413212-56413667]
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Tissue distribution of vista25288
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Transcription factor that possibly regulate vista25288[chr17:56413212-56413667]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 56399196 56418052 POLR2A UCSC Txn Factor no Conserved 108275032
chr17 56399196 56418052 POLR2A UCSC Txn Factor no Conserved 108275033
chr17 56399196 56418052 POLR2A UCSC Txn Factor no Conserved 108275034
chr17 56399196 56418052 POLR2A UCSC Txn Factor no Conserved 108275035
chr17 56399196 56418052 POLR2A UCSC Txn Factor no Conserved 108275036
chr17 56399196 56418052 POLR2A UCSC Txn Factor no Conserved 108275037
chr17 56413074 56413624 GATA2 UCSC Txn Factor no Conserved 108275088
chr17 56413074 56413624 GATA2 UCSC Txn Factor no Conserved 108275089
chr17 56413128 56413879 GATA1 UCSC Txn Factor no Conserved 108275095
chr17 56413234 56413601 RUNX3 UCSC Txn Factor no Conserved 108275109
chr17 56413295 56413591 ELF1 UCSC Txn Factor no Conserved 108275116
chr17 56413333 56413546 SPI1 UCSC Txn Factor no Conserved 108275121
chr17 56413223 56413244 ZNF263 JASPAR yes 21262495
chr17 56413223 56413244 ZNF263 JASPAR yes 55012679
chr17 56413244 56413250 HiNF-A TRANSFAC yes 21262496
chr17 56413244 56413250 HiNF-A TRANSFAC yes 55012680
chr17 56413276 56413297 IRF1 JASPAR yes 21262497
chr17 56413276 56413297 IRF1 JASPAR yes 55012681
chr17 56413280 56413294 STAT1 JASPAR yes 21262498
chr17 56413280 56413294 STAT1 JASPAR yes 55012682
chr17 56413280 56413295 STAT2 JASPAR yes 21262499
chr17 56413280 56413295 STAT2 JASPAR yes 55012683
chr17 56413304 56413310 YY1 JASPAR yes 21262500
chr17 56413304 56413310 YY1 JASPAR yes 55012684
chr17 56413313 56413328 TFAP2A JASPAR yes 21262501
chr17 56413313 56413328 TFAP2A JASPAR yes 55012685
chr17 56413315 56413330 TFAP2A JASPAR yes 21262502
chr17 56413315 56413330 TFAP2C JASPAR yes 21262503
chr17 56413315 56413330 TFAP2A JASPAR yes 55012686
chr17 56413315 56413330 TFAP2C JASPAR yes 55012687
chr17 56413316 56413327 TFAP2A JASPAR yes 21262504
chr17 56413316 56413327 TFAP2A JASPAR yes 55012688
chr17 56413317 56413326 TFAP2A JASPAR yes 21262505
chr17 56413317 56413326 TFAP2A JASPAR yes 55012689
chr17 56413321 56413326 SP1 TRANSFAC yes 21262506
chr17 56413321 56413326 SP1 TRANSFAC yes 55012690
chr17 56413359 56413365 YY1 JASPAR yes 21262507
chr17 56413359 56413365 YY1 JASPAR yes 55012691
chr17 56413373 56413376 MYB TRANSFAC yes 21262508
chr17 56413373 56413376 MYB TRANSFAC yes 55012692
chr17 56413384 56413390 SOX10 JASPAR yes 21262509
chr17 56413384 56413390 SOX10 JASPAR yes 55012693
chr17 56413387 56413398 FOXA1 JASPAR yes 21262510
chr17 56413387 56413398 FOXA1 JASPAR yes 55012694
chr17 56413387 56413402 FOXA1 JASPAR yes 21262511
chr17 56413387 56413402 FOXA1 JASPAR yes 55012695
chr17 56413403 56413418 RUNX2 JASPAR yes 21262512
chr17 56413403 56413418 RUNX2 JASPAR yes 55012696
chr17 56413416 56413419 MYB TRANSFAC yes 21262513
chr17 56413416 56413419 MYB TRANSFAC yes 55012697
chr17 56413425 56413439 SPI1 JASPAR yes 21262514
chr17 56413425 56413439 SPIC JASPAR yes 21262515
chr17 56413425 56413439 SPI1 JASPAR yes 55012698
chr17 56413425 56413439 SPIC JASPAR yes 55012699
chr17 56413426 56413439 ELF1 JASPAR yes 21262516
chr17 56413426 56413439 ELF1 JASPAR yes 55012700
chr17 56413427 56413439 EHF JASPAR yes 21262517
chr17 56413427 56413439 ELF1 JASPAR yes 21262518
chr17 56413427 56413439 ELF4 JASPAR yes 21262519
chr17 56413427 56413439 EHF JASPAR yes 55012701
chr17 56413427 56413439 ELF1 JASPAR yes 55012702
chr17 56413427 56413439 ELF4 JASPAR yes 55012703
chr17 56413427 56413440 ELF3 JASPAR yes 21262520
chr17 56413427 56413440 ELF3 JASPAR yes 55012704
chr17 56413428 56413439 ELF5 JASPAR yes 21262521
chr17 56413428 56413439 ETV2 JASPAR yes 21262522
chr17 56413428 56413439 ELF5 JASPAR yes 55012705
chr17 56413428 56413439 ETV2 JASPAR yes 55012706
chr17 56413429 56413439 ERF JASPAR yes 21262523
chr17 56413429 56413439 ERG JASPAR yes 21262524
chr17 56413429 56413439 ETS1 JASPAR yes 21262525
chr17 56413429 56413439 ETV3 JASPAR yes 21262526
chr17 56413429 56413439 FEV JASPAR yes 21262527
chr17 56413429 56413439 FLI1 JASPAR yes 21262528
chr17 56413429 56413439 GABPA JASPAR yes 21262529
chr17 56413429 56413439 ERF JASPAR yes 55012707
chr17 56413429 56413439 ERG JASPAR yes 55012708
chr17 56413429 56413439 ETS1 JASPAR yes 55012709
chr17 56413429 56413439 ETV3 JASPAR yes 55012710
chr17 56413429 56413439 FEV JASPAR yes 55012711
chr17 56413429 56413439 FLI1 JASPAR yes 55012712
chr17 56413429 56413439 GABPA JASPAR yes 55012713
chr17 56413429 56413440 ELK4 JASPAR yes 21262530
chr17 56413429 56413440 FLI1 JASPAR yes 21262531
chr17 56413429 56413440 ELK4 JASPAR yes 55012714
chr17 56413429 56413440 FLI1 JASPAR yes 55012715
chr17 56413430 56413438 EHF JASPAR yes 21262532
chr17 56413430 56413438 FEV JASPAR yes 21262533
chr17 56413430 56413438 EHF JASPAR yes 55012716
chr17 56413430 56413438 FEV JASPAR yes 55012717
chr17 56413431 56413438 SPI1 JASPAR yes 21262534
chr17 56413431 56413438 SPI1 JASPAR yes 55012718
chr17 56413456 56413461 SP1 TRANSFAC yes 21262535
chr17 56413456 56413461 SP1 TRANSFAC yes 55012719
chr17 56413474 56413479 MYC TRANSFAC yes 21262536
chr17 56413474 56413479 MYC TRANSFAC yes 55012720
chr17 56413478 56413483 TFAP2A TRANSFAC yes 21262537
chr17 56413478 56413483 TFAP2A TRANSFAC yes 55012721
chr17 56413478 56413484 MZF1 JASPAR yes 21262538
chr17 56413478 56413484 MZF1 JASPAR yes 55012722
chr17 56413485 56413500 RFX5 JASPAR yes 21262539
chr17 56413485 56413500 RFX5 JASPAR yes 55012723
chr17 56413495 56413501 SOX10 JASPAR yes 21262540
chr17 56413495 56413501 SOX10 JASPAR yes 55012724
chr17 56413498 56413513 PRDM1 JASPAR yes 21262541
chr17 56413498 56413513 PRDM1 JASPAR yes 55012725
chr17 56413499 56413510 E2F6 JASPAR yes 21262542
chr17 56413499 56413510 E2F6 JASPAR yes 55012726
chr17 56413521 56413532 CEBPB JASPAR yes 21262543
chr17 56413521 56413532 CEBPB JASPAR yes 55012727
chr17 56413522 56413532 CEBPB JASPAR yes 21262544
chr17 56413522 56413532 CEBPD JASPAR yes 21262545
chr17 56413522 56413532 CEBPE JASPAR yes 21262546
chr17 56413522 56413532 CEBPB JASPAR yes 55012728
chr17 56413522 56413532 CEBPD JASPAR yes 55012729
chr17 56413522 56413532 CEBPE JASPAR yes 55012730
chr17 56413522 56413533 CEBPA JASPAR yes 21262547
chr17 56413522 56413533 CEBPA JASPAR yes 55012731
chr17 56413578 56413584 MZF1 JASPAR yes 21262548
chr17 56413578 56413584 MZF1 JASPAR yes 55012732
chr17 56413586 56413597 EBF1 JASPAR yes 21262549
chr17 56413586 56413597 EBF1 JASPAR yes 55012733
chr17 56413593 56413612 PAX5 JASPAR yes 21262550
chr17 56413593 56413612 PAX5 JASPAR yes 55012734
chr17 56413595 56413599 LFA1 TRANSFAC yes 21262551
chr17 56413595 56413599 LFA1 TRANSFAC yes 55012735
chr17 56413605 56413610 ETS2 TRANSFAC yes 21262552
chr17 56413605 56413610 ETS2 TRANSFAC yes 55012736
chr17 56413609 56413618 SNAI2 JASPAR yes 21262553
chr17 56413609 56413618 SNAI2 JASPAR yes 55012737
chr17 56413609 56413619 ID4 JASPAR yes 21262554
chr17 56413609 56413619 TCF3 JASPAR yes 21262555
chr17 56413609 56413619 TCF4 JASPAR yes 21262556
chr17 56413609 56413619 ID4 JASPAR yes 55012738
chr17 56413609 56413619 TCF3 JASPAR yes 55012739
chr17 56413609 56413619 TCF4 JASPAR yes 55012740
chr17 56413613 56413622 NFIX JASPAR yes 21262557
chr17 56413613 56413622 NFIX JASPAR yes 55012741
chr17 56413613 56413623 NFIA JASPAR yes 21262558
chr17 56413613 56413623 NFIA JASPAR yes 55012742
chr17 56413615 56413621 NFIC JASPAR yes 21262559
chr17 56413615 56413621 NFIC JASPAR yes 55012743
chr17 56413624 56413636 HES5 JASPAR yes 21262560
chr17 56413624 56413636 HES7 JASPAR yes 21262561
chr17 56413624 56413636 HES5 JASPAR yes 55012744
chr17 56413624 56413636 HES7 JASPAR yes 55012745
chr17 56413635 56413656 REST JASPAR yes 21262562
chr17 56413635 56413656 REST JASPAR yes 55012746
chr17 56413636 56413655 REST JASPAR yes 21262563
chr17 56413636 56413655 REST JASPAR yes 55012747
SNP sites on vista25288[chr17:56413212-56413667]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 56413213 rs542013213 T C
GATA1 GATA2 POLR2A
4955972
chr17 56413583 rs28415798 C T
ELF1 GATA1 GATA2 MZF1 POLR2A RUNX3
4955973
chr17 56413635 rs75394768 C A
GATA1 HES5 HES7 POLR2A REST
4955974
Genes possibly regulated by vista25288[chr17:56413212-56413667]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 56347217 56358296 - MPO ENSG00000005381.6 56358296 0.93 1.0 16085 45084
chr17 56378592 56406152 - BZRAP1 ENSG00000005379.11 56406152 0.77 0.93 16086 92940
chr17 56422539 56430454 - SUPT4H1 ENSG00000213246.2 56430454 0.63 0.99 16087 83213
chr17 56429861 56494956 - RNF43 ENSG00000108375.8 56494956 0.74 1.0 16088 18711
Expression level of Genes
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miRNAs possibly regulated by vista25288[chr17:56413212-56413667]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results