EnhancerDB
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  3. rs28415798[chr17:56413583]
Enhancers that have rs28415798[chr17:56413583]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 56410845 56419415 enh4498
Liver (HepG2) Epithelial (MCF-7) Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Uterus Blood (Karpas-422) Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Heart
chr17 56413212 56413667 vista25288
VISTA
Transcript factors that have rs28415798[chr17:56413583]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 56399196 56418052 POLR2A UCSC Txn Factor no Conserved 108275032
chr17 56399196 56418052 POLR2A UCSC Txn Factor no Conserved 108275033
chr17 56399196 56418052 POLR2A UCSC Txn Factor no Conserved 108275034
chr17 56399196 56418052 POLR2A UCSC Txn Factor no Conserved 108275035
chr17 56399196 56418052 POLR2A UCSC Txn Factor no Conserved 108275036
chr17 56399196 56418052 POLR2A UCSC Txn Factor no Conserved 108275037
chr17 56411714 56418052 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21774005
chr17 56411714 56418052 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108275067
chr17 56411714 56418052 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108275068
chr17 56411714 56418052 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108275069
chr17 56411714 56418052 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108275070
chr17 56412873 56413597 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108275082
chr17 56412873 56413597 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108275083
chr17 56413025 56413589 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21774015
chr17 56413025 56413589 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108275086
chr17 56413025 56413589 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108275087
chr17 56413074 56413624 GATA2 UCSC Txn Factor no Conserved 108275088
chr17 56413074 56413624 GATA2 UCSC Txn Factor no Conserved 108275089
chr17 56413074 56413624 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108275090
chr17 56413074 56413624 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108275091
chr17 56413114 56413584 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21774016
chr17 56413114 56413584 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108275092
chr17 56413128 56413879 GATA1 UCSC Txn Factor no Conserved 108275095
chr17 56413150 56413640 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108275097
chr17 56413213 56413583 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108275106
chr17 56413220 56413844 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108275107
chr17 56413222 56413626 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108275108
chr17 56413234 56413601 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21774023
chr17 56413234 56413601 RUNX3 UCSC Txn Factor no Conserved 108275109
chr17 56413234 56413601 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108275110
chr17 56413295 56413591 ELF1 UCSC Txn Factor no Conserved 108275116
chr17 56413315 56413591 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21774027
chr17 56413315 56413591 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108275119
chr17 56413578 56413584 MZF1 JASPAR yes 21262548
chr17 56413578 56413584 MZF1 JASPAR yes 55012732
Genes associated with rs28415798[chr17:56413583], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More