EnhancerDB
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  3. vista25341[chr17:57830594-57831044]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25341[chr17:57830594-57831044]
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Tissue distribution of vista25341
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Transcription factor that possibly regulate vista25341[chr17:57830594-57831044]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 57830772 57831197 CTCF UCSC Txn Factor no Conserved 108276361
chr17 57830861 57831144 SMC3 UCSC Txn Factor no Conserved 108276378
chr17 57830884 57831121 RAD21 UCSC Txn Factor no Conserved 108276385
chr17 57830593 57830608 HNF4A JASPAR yes 21264785
chr17 57830593 57830608 HNF4A JASPAR yes 55077308
chr17 57830625 57830629 NFE TRANSFAC yes 21264786
chr17 57830625 57830629 NFE TRANSFAC yes 55077309
chr17 57830629 57830644 FOXP1 JASPAR yes 21264787
chr17 57830629 57830644 FOXP1 JASPAR yes 55077310
chr17 57830630 57830645 FOXP1 JASPAR yes 21264788
chr17 57830630 57830645 FOXP1 JASPAR yes 55077311
chr17 57830631 57830646 FOXP1 JASPAR yes 21264789
chr17 57830631 57830646 FOXP1 JASPAR yes 55077312
chr17 57830632 57830647 FOXP1 JASPAR yes 21264790
chr17 57830632 57830647 FOXP1 JASPAR yes 55077313
chr17 57830632 57830653 IRF1 JASPAR yes 21264791
chr17 57830632 57830653 IRF1 JASPAR yes 55077314
chr17 57830633 57830648 FOXP1 JASPAR yes 21264792
chr17 57830633 57830648 FOXP1 JASPAR yes 55077315
chr17 57830636 57830651 PRDM1 JASPAR yes 21264793
chr17 57830636 57830651 STAT2 JASPAR yes 21264794
chr17 57830636 57830651 PRDM1 JASPAR yes 55077316
chr17 57830636 57830651 STAT2 JASPAR yes 55077317
chr17 57830661 57830671 EN2 JASPAR yes 21264795
chr17 57830661 57830671 EN2 JASPAR yes 55077318
chr17 57830662 57830670 BARX1 JASPAR yes 21264796
chr17 57830662 57830670 BARX1 JASPAR yes 55077319
chr17 57830676 57830687 DUX4 JASPAR yes 21264797
chr17 57830676 57830687 DUX4 JASPAR yes 55077320
chr17 57830684 57830695 PROP1 JASPAR yes 21264798
chr17 57830684 57830695 PROP1 JASPAR yes 55077321
chr17 57830685 57830689 YY1 TRANSFAC yes 21264799
chr17 57830685 57830689 YY1 TRANSFAC yes 55077322
chr17 57830690 57830694 YY1 TRANSFAC yes 21264800
chr17 57830690 57830694 YY1 TRANSFAC yes 55077323
chr17 57830702 57830712 MEOX2 JASPAR yes 21264801
chr17 57830702 57830712 MEOX2 JASPAR yes 55077324
chr17 57830708 57830712 YY1 TRANSFAC yes 21264802
chr17 57830708 57830712 YY1 TRANSFAC yes 55077325
chr17 57830709 57830723 E2F7 JASPAR yes 21264803
chr17 57830709 57830723 E2F7 JASPAR yes 55077326
chr17 57830723 57830737 JUN JASPAR yes 21264804
chr17 57830723 57830737 JUN JASPAR yes 55077327
chr17 57830726 57830737 JUNB JASPAR yes 21264805
chr17 57830726 57830737 JUNB JASPAR yes 55077328
chr17 57830727 57830738 FOS JASPAR yes 21264806
chr17 57830727 57830738 JUND JASPAR yes 21264807
chr17 57830727 57830738 FOS JASPAR yes 55077329
chr17 57830727 57830738 JUND JASPAR yes 55077330
chr17 57830728 57830737 JDP2 JASPAR yes 21264808
chr17 57830728 57830737 JDP2 JASPAR yes 55077331
chr17 57830728 57830742 JUN JASPAR yes 21264809
chr17 57830728 57830742 JUN JASPAR yes 55077332
chr17 57830729 57830740 BATF JASPAR yes 21264810
chr17 57830729 57830740 BATF JASPAR yes 55077333
chr17 57830742 57830752 ALX3 JASPAR yes 21264811
chr17 57830742 57830752 EMX1 JASPAR yes 21264812
chr17 57830742 57830752 GSX2 JASPAR yes 21264813
chr17 57830742 57830752 HOXA2 JASPAR yes 21264814
chr17 57830742 57830752 HOXB2 JASPAR yes 21264815
chr17 57830742 57830752 HOXB3 JASPAR yes 21264816
chr17 57830742 57830752 MEOX1 JASPAR yes 21264817
chr17 57830742 57830752 MEOX2 JASPAR yes 21264818
chr17 57830742 57830752 MIXL1 JASPAR yes 21264819
chr17 57830742 57830752 MNX1 JASPAR yes 21264820
chr17 57830742 57830752 ALX3 JASPAR yes 55077334
chr17 57830742 57830752 EMX1 JASPAR yes 55077335
chr17 57830742 57830752 GSX2 JASPAR yes 55077336
chr17 57830742 57830752 HOXA2 JASPAR yes 55077337
chr17 57830742 57830752 HOXB2 JASPAR yes 55077338
chr17 57830742 57830752 HOXB3 JASPAR yes 55077339
chr17 57830742 57830752 MEOX1 JASPAR yes 55077340
chr17 57830742 57830752 MEOX2 JASPAR yes 55077341
chr17 57830742 57830752 MIXL1 JASPAR yes 55077342
chr17 57830742 57830752 MNX1 JASPAR yes 55077343
chr17 57830743 57830751 LMX1A JASPAR yes 21264821
chr17 57830743 57830751 LMX1B JASPAR yes 21264822
chr17 57830743 57830751 NKX6-1 JASPAR yes 21264823
chr17 57830743 57830751 NKX6-2 JASPAR yes 21264824
chr17 57830743 57830751 PDX1 JASPAR yes 21264825
chr17 57830743 57830751 VAX1 JASPAR yes 21264826
chr17 57830743 57830751 VAX2 JASPAR yes 21264827
chr17 57830743 57830751 VSX1 JASPAR yes 21264828
chr17 57830743 57830751 LMX1A JASPAR yes 55077344
chr17 57830743 57830751 LMX1B JASPAR yes 55077345
chr17 57830743 57830751 NKX6-1 JASPAR yes 55077346
chr17 57830743 57830751 NKX6-2 JASPAR yes 55077347
chr17 57830743 57830751 PDX1 JASPAR yes 55077348
chr17 57830743 57830751 VAX1 JASPAR yes 55077349
chr17 57830743 57830751 VAX2 JASPAR yes 55077350
chr17 57830743 57830751 VSX1 JASPAR yes 55077351
chr17 57830748 57830751 MYB TRANSFAC yes 21264829
chr17 57830748 57830751 MYB TRANSFAC yes 55077352
chr17 57830755 57830764 SRY JASPAR yes 21264830
chr17 57830755 57830764 SRY JASPAR yes 55077353
chr17 57830757 57830760 MYB TRANSFAC yes 21264831
chr17 57830757 57830760 MYB TRANSFAC yes 55077354
chr17 57830757 57830778 IRF1 JASPAR yes 21264832
chr17 57830757 57830778 IRF1 JASPAR yes 55077355
chr17 57830761 57830775 SPI1 JASPAR yes 21264833
chr17 57830761 57830775 SPI1 JASPAR yes 55077356
chr17 57830761 57830776 STAT2 JASPAR yes 21264834
chr17 57830761 57830776 STAT2 JASPAR yes 55077357
chr17 57830768 57830782 NR2F1 JASPAR yes 21264835
chr17 57830768 57830782 NR2F1 JASPAR yes 55077358
chr17 57830768 57830783 HNF4G JASPAR yes 21264836
chr17 57830768 57830783 HNF4G JASPAR yes 55077359
chr17 57830782 57830797 STAT1 JASPAR yes 21264837
chr17 57830782 57830797 STAT1 JASPAR yes 55077360
chr17 57830790 57830796 HiNF-A TRANSFAC yes 21264838
chr17 57830790 57830796 HiNF-A TRANSFAC yes 55077361
chr17 57830795 57830815 TP53 JASPAR yes 21264839
chr17 57830795 57830815 TP53 JASPAR yes 55077362
chr17 57830812 57830824 SRF JASPAR yes 21264840
chr17 57830812 57830824 SRF JASPAR yes 55077363
chr17 57830813 57830826 POU2F2 JASPAR yes 21264841
chr17 57830813 57830826 POU2F2 JASPAR yes 55077364
chr17 57830826 57830840 JUN JASPAR yes 21264842
chr17 57830826 57830840 JUN JASPAR yes 55077365
chr17 57830827 57830831 YY1 TRANSFAC yes 21264843
chr17 57830827 57830831 YY1 TRANSFAC yes 55077366
chr17 57830829 57830840 JUNB JASPAR yes 21264844
chr17 57830829 57830840 JUNB JASPAR yes 55077367
chr17 57830830 57830841 FOS JASPAR yes 21264845
chr17 57830830 57830841 FOSL1 JASPAR yes 21264846
chr17 57830830 57830841 JUND JASPAR yes 21264847
chr17 57830830 57830841 NFE2 JASPAR yes 21264848
chr17 57830830 57830841 FOS JASPAR yes 55077368
chr17 57830830 57830841 FOSL1 JASPAR yes 55077369
chr17 57830830 57830841 JUND JASPAR yes 55077370
chr17 57830830 57830841 NFE2 JASPAR yes 55077371
chr17 57830831 57830840 JDP2 JASPAR yes 21264849
chr17 57830831 57830840 JDP2 JASPAR yes 55077372
chr17 57830831 57830845 JUN JASPAR yes 21264850
chr17 57830831 57830845 JUN JASPAR yes 55077373
chr17 57830872 57830876 YY1 TRANSFAC yes 21264851
chr17 57830872 57830876 YY1 TRANSFAC yes 55077374
chr17 57830885 57830896 DMRT3 JASPAR yes 21264852
chr17 57830885 57830896 DMRT3 JASPAR yes 55077375
chr17 57830889 57830892 MYB TRANSFAC yes 21264853
chr17 57830889 57830892 MYB TRANSFAC yes 55077376
chr17 57830892 57830896 YY1 TRANSFAC yes 21264854
chr17 57830892 57830896 YY1 TRANSFAC yes 55077377
chr17 57830903 57830907 TEAD2 TRANSFAC yes 21264855
chr17 57830903 57830907 TEAD2 TRANSFAC yes 55077378
chr17 57830903 57830908 TBP TRANSFAC yes 21264856
chr17 57830903 57830908 TBP TRANSFAC yes 55077379
chr17 57830958 57830962 TEAD2 TRANSFAC yes 21264857
chr17 57830958 57830962 TEAD2 TRANSFAC yes 55077380
chr17 57830982 57831001 CTCF JASPAR yes 21264858
chr17 57830982 57831001 CTCF JASPAR yes 55077381
chr17 57830999 57831014 STAT1 JASPAR yes 21264859
chr17 57830999 57831014 STAT1 JASPAR yes 55077382
chr17 57831001 57831012 STAT1 JASPAR yes 21264860
chr17 57831001 57831012 STAT3 JASPAR yes 21264861
chr17 57831001 57831012 STAT1 JASPAR yes 55077383
chr17 57831001 57831012 STAT3 JASPAR yes 55077384
chr17 57831020 57831026 SOX10 JASPAR yes 21264862
chr17 57831020 57831026 SOX10 JASPAR yes 55077385
chr17 57831031 57831036 GATA2 JASPAR yes 21264863
chr17 57831031 57831036 GATA2 JASPAR yes 55077386
SNP sites on vista25341[chr17:57830594-57831044]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 57830621 rs368338383 A G no 4961436
chr17 57830645 rs549192243 AAAG A
FOXP1 IRF1 PRDM1 STAT2
4961437
chr17 57830921 rs76580836 A G
CTCF RAD21 SMC3
4961438
chr17 57831027 rs78138730 C A,T
CTCF RAD21 SMC3
4961439
chr17 57831028 rs551706610 CCCA C
CTCF RAD21 SMC3
4961440
chr17 57831032 rs553975851 TA T
CTCF GATA2 RAD21 SMC3
4961441
Genes possibly regulated by vista25341[chr17:57830594-57831044]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 57751997 57784987 - PTRH2 ENSG00000141378.13 57784987 0.88 1.0 16105 54393
chr17 57784553 57919616 + VMP1 ENSG00000062716.6 57784553 0.71 0.99 16106 53959
Expression level of Genes
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miRNAs possibly regulated by vista25341[chr17:57830594-57831044]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr17 57918672 57918692 + hsa-miR-21-3p MIMAT0004494 57915291 0.019358134189309203 0.710898 0.678791 730
Expression level of miRNAs
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