EnhancerDB
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Enhancers that have rs549192243[chr17:57830645]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57820705 57849586 enh4505
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
chr17 57830594 57831044 vista25341
VISTA
Transcript factors that have rs549192243[chr17:57830645]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57830474 57831486 ZNF143 GTRD no Epithelial (MCF-7) 21775262
chr17 57830474 57831486 ZNF143 GTRD no Epithelial (MCF-7) 108276353
chr17 57830477 57831335 ZNF143 GTRD no Epithelial (MCF-7) 21775263
chr17 57830477 57831335 ZNF143 GTRD no Epithelial (MCF-7) 108276354
chr17 57830479 57831253 ZNF143 GTRD no Epithelial (MCF-7) 21775264
chr17 57830479 57831253 ZNF143 GTRD no Epithelial (MCF-7) 108276355
chr17 57830630 57830645 FOXP1 JASPAR yes 21264788
chr17 57830630 57830645 FOXP1 JASPAR yes 55077311
chr17 57830631 57830646 FOXP1 JASPAR yes 21264789
chr17 57830631 57830646 FOXP1 JASPAR yes 55077312
chr17 57830632 57830647 FOXP1 JASPAR yes 21264790
chr17 57830632 57830647 FOXP1 JASPAR yes 55077313
chr17 57830632 57830653 IRF1 JASPAR yes 21264791
chr17 57830632 57830653 IRF1 JASPAR yes 55077314
chr17 57830633 57830648 FOXP1 JASPAR yes 21264792
chr17 57830633 57830648 FOXP1 JASPAR yes 55077315
chr17 57830636 57830651 PRDM1 JASPAR yes 21264793
chr17 57830636 57830651 STAT2 JASPAR yes 21264794
chr17 57830636 57830651 PRDM1 JASPAR yes 55077316
chr17 57830636 57830651 STAT2 JASPAR yes 55077317
Genes associated with rs549192243[chr17:57830645], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More