EnhancerDB
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  3. vista25347[chr17:57844650-57844791]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25347[chr17:57844650-57844791]
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Tissue distribution of vista25347
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Transcription factor that possibly regulate vista25347[chr17:57844650-57844791]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 57844643 57844659 SOX8 JASPAR yes 21265277
chr17 57844643 57844659 SOX8 JASPAR yes 55079360
chr17 57844649 57844659 NKX2-3 JASPAR yes 21265278
chr17 57844649 57844659 NKX2-3 JASPAR yes 55079361
chr17 57844650 57844658 ISL2 JASPAR yes 21265279
chr17 57844650 57844658 ISL2 JASPAR yes 55079362
chr17 57844650 57844659 NKX3-2 JASPAR yes 21265280
chr17 57844650 57844659 NKX3-2 JASPAR yes 55079363
chr17 57844677 57844688 PROP1 JASPAR yes 21265281
chr17 57844677 57844688 PROP1 JASPAR yes 55079364
chr17 57844680 57844696 POU4F2 JASPAR yes 21265282
chr17 57844680 57844696 POU4F3 JASPAR yes 21265283
chr17 57844680 57844696 POU4F2 JASPAR yes 55079365
chr17 57844680 57844696 POU4F3 JASPAR yes 55079366
chr17 57844686 57844690 TEAD2 TRANSFAC yes 21265284
chr17 57844686 57844690 TEAD2 TRANSFAC yes 55079367
chr17 57844686 57844691 TBP TRANSFAC yes 21265285
chr17 57844686 57844691 TBP TRANSFAC yes 55079368
chr17 57844690 57844695 ETS2 TRANSFAC yes 21265286
chr17 57844690 57844695 ETS2 TRANSFAC yes 55079369
chr17 57844690 57844698 FEV JASPAR yes 21265287
chr17 57844690 57844698 FEV JASPAR yes 55079370
chr17 57844691 57844702 NFKB1 JASPAR yes 21265288
chr17 57844691 57844702 NFKB1 JASPAR yes 55079371
chr17 57844692 57844702 REL JASPAR yes 21265289
chr17 57844692 57844702 REL JASPAR yes 55079372
chr17 57844715 57844727 HNF1B JASPAR yes 21265290
chr17 57844715 57844727 HNF1B JASPAR yes 55079373
chr17 57844716 57844730 IRF8 JASPAR yes 21265291
chr17 57844716 57844730 IRF8 JASPAR yes 55079374
chr17 57844718 57844732 TCF7L2 JASPAR yes 21265292
chr17 57844718 57844732 TCF7L2 JASPAR yes 55079375
chr17 57844722 57844728 TCF4 TRANSFAC yes 21265293
chr17 57844722 57844728 TCF4 TRANSFAC yes 55079376
chr17 57844745 57844755 ETS1 JASPAR yes 21265294
chr17 57844745 57844755 ETS1 JASPAR yes 55079377
chr17 57844745 57844756 ETV2 JASPAR yes 21265295
chr17 57844745 57844756 ETV2 JASPAR yes 55079378
chr17 57844747 57844760 SCRT2 JASPAR yes 21265296
chr17 57844747 57844760 SCRT2 JASPAR yes 55079379
chr17 57844762 57844773 FOXP2 JASPAR yes 21265297
chr17 57844762 57844773 FOXP2 JASPAR yes 55079380
chr17 57844763 57844767 TEAD2 TRANSFAC yes 21265298
chr17 57844763 57844767 TEAD2 TRANSFAC yes 55079381
chr17 57844763 57844768 TBP TRANSFAC yes 21265299
chr17 57844763 57844768 TBP TRANSFAC yes 55079382
chr17 57844764 57844772 FOXG1 JASPAR yes 21265300
chr17 57844764 57844772 FOXG1 JASPAR yes 55079383
chr17 57844772 57844780 FOXO3 JASPAR yes 21265301
chr17 57844772 57844780 FOXO3 JASPAR yes 55079384
SNP sites on vista25347[chr17:57844650-57844791]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 57844698 rs572188359 T C
FEV NFKB1 REL
4961584
Genes possibly regulated by vista25347[chr17:57844650-57844791]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 57751997 57784987 - PTRH2 ENSG00000141378.13 57784987 0.88 1.0 16105 40337
chr17 57784553 57919616 + VMP1 ENSG00000062716.6 57784553 0.71 0.99 16106 39903
Expression level of Genes
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miRNAs possibly regulated by vista25347[chr17:57844650-57844791]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr17 57918672 57918692 + hsa-miR-21-3p MIMAT0004494 57915291 0.023083258927026448 0.710898 0.678791 730
Expression level of miRNAs
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