EnhancerDB
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  3. rs572188359[chr17:57844698]
Enhancers that have rs572188359[chr17:57844698]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57820705 57849586 enh4505
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
chr17 57844650 57844791 vista25347
VISTA
Transcript factors that have rs572188359[chr17:57844698]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57844556 57844892 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 21775492
chr17 57844556 57844892 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 108276717
chr17 57844690 57844698 FEV JASPAR yes 21265287
chr17 57844690 57844698 FEV JASPAR yes 55079370
chr17 57844691 57844702 NFKB1 JASPAR yes 21265288
chr17 57844691 57844702 NFKB1 JASPAR yes 55079371
chr17 57844692 57844702 REL JASPAR yes 21265289
chr17 57844692 57844702 REL JASPAR yes 55079372
Genes associated with rs572188359[chr17:57844698], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More