EnhancerDB
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  3. vista25402[chr17:59391031-59391430]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25402[chr17:59391031-59391430]
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Tissue distribution of vista25402
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Transcription factor that possibly regulate vista25402[chr17:59391031-59391430]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 59391020 59391033 ZBTB18 JASPAR yes 21268409
chr17 59391020 59391033 ZBTB18 JASPAR yes 55146956
chr17 59391033 59391044 NFKB1 JASPAR yes 21268410
chr17 59391033 59391044 NFKB1 JASPAR yes 55146957
chr17 59391038 59391044 ETS1 JASPAR yes 21268411
chr17 59391038 59391044 ETS1 JASPAR yes 55146958
chr17 59391038 59391048 ELK1 JASPAR yes 21268412
chr17 59391038 59391048 ELK1 JASPAR yes 55146959
chr17 59391071 59391083 MYBL1 JASPAR yes 21268413
chr17 59391071 59391083 MYBL1 JASPAR yes 55146960
chr17 59391073 59391084 HOXC11 JASPAR yes 21268414
chr17 59391073 59391084 HOXC12 JASPAR yes 21268415
chr17 59391073 59391084 HOXC11 JASPAR yes 55146961
chr17 59391073 59391084 HOXC12 JASPAR yes 55146962
chr17 59391073 59391088 HNF1A JASPAR yes 21268416
chr17 59391073 59391088 HNF1A JASPAR yes 55146963
chr17 59391074 59391086 HNF1B JASPAR yes 21268417
chr17 59391074 59391086 HNF1B JASPAR yes 55146964
chr17 59391074 59391087 HNF1B JASPAR yes 21268418
chr17 59391074 59391087 HNF1B JASPAR yes 55146965
chr17 59391076 59391079 MYB TRANSFAC yes 21268419
chr17 59391076 59391079 MYB TRANSFAC yes 55146966
chr17 59391077 59391086 VENTX JASPAR yes 21268420
chr17 59391077 59391086 VENTX JASPAR yes 55146967
chr17 59391106 59391112 SOX10 JASPAR yes 21268421
chr17 59391106 59391112 SOX10 JASPAR yes 55146968
chr17 59391112 59391121 VENTX JASPAR yes 21268422
chr17 59391112 59391121 VENTX JASPAR yes 55146969
chr17 59391117 59391129 IRF1 JASPAR yes 21268423
chr17 59391117 59391129 IRF1 JASPAR yes 55146970
chr17 59391130 59391134 LFA1 TRANSFAC yes 21268424
chr17 59391130 59391134 LFA1 TRANSFAC yes 55146971
chr17 59391136 59391151 MEF2C JASPAR yes 21268425
chr17 59391136 59391151 MEF2C JASPAR yes 55146972
chr17 59391137 59391142 GATA2 JASPAR yes 21268426
chr17 59391137 59391142 GATA2 JASPAR yes 55146973
chr17 59391137 59391152 MEF2A JASPAR yes 21268427
chr17 59391137 59391152 MEF2A JASPAR yes 55146974
chr17 59391138 59391150 MEF2A JASPAR yes 21268428
chr17 59391138 59391150 MEF2A JASPAR yes 55146975
chr17 59391168 59391178 ALX3 JASPAR yes 21268429
chr17 59391168 59391178 EN2 JASPAR yes 21268430
chr17 59391168 59391178 ESX1 JASPAR yes 21268431
chr17 59391168 59391178 GBX2 JASPAR yes 21268432
chr17 59391168 59391178 GSX1 JASPAR yes 21268433
chr17 59391168 59391178 GSX2 JASPAR yes 21268434
chr17 59391168 59391178 LBX2 JASPAR yes 21268435
chr17 59391168 59391178 LHX2 JASPAR yes 21268436
chr17 59391168 59391178 ALX3 JASPAR yes 55146976
chr17 59391168 59391178 EN2 JASPAR yes 55146977
chr17 59391168 59391178 ESX1 JASPAR yes 55146978
chr17 59391168 59391178 GBX2 JASPAR yes 55146979
chr17 59391168 59391178 GSX1 JASPAR yes 55146980
chr17 59391168 59391178 GSX2 JASPAR yes 55146981
chr17 59391168 59391178 LBX2 JASPAR yes 55146982
chr17 59391168 59391178 LHX2 JASPAR yes 55146983
chr17 59391169 59391173 H1TF2 TRANSFAC yes 21268437
chr17 59391169 59391173 NFE TRANSFAC yes 21268438
chr17 59391169 59391173 SRF TRANSFAC yes 21268439
chr17 59391169 59391173 H1TF2 TRANSFAC yes 55146984
chr17 59391169 59391173 NFE TRANSFAC yes 55146985
chr17 59391169 59391173 SRF TRANSFAC yes 55146986
chr17 59391169 59391177 BARX1 JASPAR yes 21268440
chr17 59391169 59391177 BSX JASPAR yes 21268441
chr17 59391169 59391177 DLX6 JASPAR yes 21268442
chr17 59391169 59391177 ISX JASPAR yes 21268443
chr17 59391169 59391177 LBX1 JASPAR yes 21268444
chr17 59391169 59391177 LHX9 JASPAR yes 21268445
chr17 59391169 59391177 MSX1 JASPAR yes 21268446
chr17 59391169 59391177 MSX2 JASPAR yes 21268447
chr17 59391169 59391177 NKX6-2 JASPAR yes 21268448
chr17 59391169 59391177 PRRX1 JASPAR yes 21268449
chr17 59391169 59391177 RAX2 JASPAR yes 21268450
chr17 59391169 59391177 SHOX JASPAR yes 21268451
chr17 59391169 59391177 UNCX JASPAR yes 21268452
chr17 59391169 59391177 BARX1 JASPAR yes 55146987
chr17 59391169 59391177 BSX JASPAR yes 55146988
chr17 59391169 59391177 DLX6 JASPAR yes 55146989
chr17 59391169 59391177 ISX JASPAR yes 55146990
chr17 59391169 59391177 LBX1 JASPAR yes 55146991
chr17 59391169 59391177 LHX9 JASPAR yes 55146992
chr17 59391169 59391177 MSX1 JASPAR yes 55146993
chr17 59391169 59391177 MSX2 JASPAR yes 55146994
chr17 59391169 59391177 NKX6-2 JASPAR yes 55146995
chr17 59391169 59391177 PRRX1 JASPAR yes 55146996
chr17 59391169 59391177 RAX2 JASPAR yes 55146997
chr17 59391169 59391177 SHOX JASPAR yes 55146998
chr17 59391169 59391177 UNCX JASPAR yes 55146999
chr17 59391173 59391181 ISL2 JASPAR yes 21268453
chr17 59391173 59391181 ISL2 JASPAR yes 55147000
chr17 59391173 59391182 NKX3-2 JASPAR yes 21268454
chr17 59391173 59391182 NKX3-2 JASPAR yes 55147001
chr17 59391220 59391232 GLI2 JASPAR yes 21268455
chr17 59391220 59391232 GLI2 JASPAR yes 55147002
chr17 59391227 59391232 MYC TRANSFAC yes 21268456
chr17 59391227 59391232 USF1 TRANSFAC yes 21268457
chr17 59391227 59391232 USF2 TRANSFAC yes 21268458
chr17 59391227 59391232 MYC TRANSFAC yes 55147003
chr17 59391227 59391232 USF1 TRANSFAC yes 55147004
chr17 59391227 59391232 USF2 TRANSFAC yes 55147005
chr17 59391227 59391234 USF1 JASPAR yes 21268459
chr17 59391227 59391234 USF1 JASPAR yes 55147006
chr17 59391239 59391243 NFE TRANSFAC yes 21268460
chr17 59391239 59391243 NFE TRANSFAC yes 55147007
chr17 59391266 59391278 INSM1 JASPAR yes 21268461
chr17 59391266 59391278 INSM1 JASPAR yes 55147008
chr17 59391267 59391281 GLIS3 JASPAR yes 21268462
chr17 59391267 59391281 GLIS3 JASPAR yes 55147009
chr17 59391273 59391280 NKX3-1 JASPAR yes 21268463
chr17 59391273 59391280 NKX3-1 JASPAR yes 55147010
chr17 59391303 59391308 ETS2 TRANSFAC yes 21268464
chr17 59391303 59391308 ETS2 TRANSFAC yes 55147011
chr17 59391331 59391338 SPIB JASPAR yes 21268465
chr17 59391331 59391338 SPIB JASPAR yes 55147012
chr17 59391336 59391346 NFATC3 JASPAR yes 21268466
chr17 59391336 59391346 NFATC3 JASPAR yes 55147013
chr17 59391337 59391344 NFATC2 JASPAR yes 21268467
chr17 59391337 59391344 NFATC2 JASPAR yes 55147014
chr17 59391344 59391350 TCF1 TRANSFAC yes 21268468
chr17 59391344 59391350 TCF1 TRANSFAC yes 55147015
chr17 59391388 59391397 NFIX JASPAR yes 21268469
chr17 59391388 59391397 NFIX JASPAR yes 55147016
chr17 59391389 59391395 NFIC JASPAR yes 21268470
chr17 59391389 59391395 NFIC JASPAR yes 55147017
chr17 59391400 59391405 GATA2 JASPAR yes 21268471
chr17 59391400 59391405 GATA2 JASPAR yes 55147018
chr17 59391405 59391415 TEAD4 JASPAR yes 21268472
chr17 59391405 59391415 TEAD4 JASPAR yes 55147019
SNP sites on vista25402[chr17:59391031-59391430]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 59391044 rs554333563 G A
ELK1 ETS1 NFKB1
4967371
chr17 59391081 rs144853964 G A
HNF1A HNF1B HOXC11 HOXC12 MYBL1 VENTX
4967372
chr17 59391149 rs3785857 T C
MEF2A MEF2C
4967373
chr17 59391211 rs564595698 C T no 4967374
chr17 59391213 rs114829704 C T no 4967375
chr17 59391312 rs148500995 G A no 4967376
chr17 59391379 rs3785856 A G no 4967377
Genes possibly regulated by vista25402[chr17:59391031-59391430]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 59477257 59486827 + TBX2 ENSG00000121068.9 59477257 0.92 0.93 16119 14173
chr17 59489112 59490641 + C17orf82 ENSG00000187013.2 59489112 0.89 0.99 16120 2318
Expression level of Genes
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miRNAs possibly regulated by vista25402[chr17:59391031-59391430]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results