EnhancerDB
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  3. rs554333563[chr17:59391044]
Enhancers that have rs554333563[chr17:59391044]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 59383635 59420035 enh17269
Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
chr17 59391031 59391430 vista25402
VISTA
Transcript factors that have rs554333563[chr17:59391044]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 59390667 59391283 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21777315
chr17 59390667 59391283 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108279387
chr17 59390843 59391183 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21777316
chr17 59390843 59391183 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108279388
chr17 59390843 59391383 ZNF143 GTRD no Epithelial (MCF-7) 21777317
chr17 59390843 59391383 ZNF143 GTRD no Epithelial (MCF-7) 108279389
chr17 59390867 59391203 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21777318
chr17 59390867 59391203 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108279390
chr17 59390868 59391128 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21777319
chr17 59390868 59391128 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108279391
chr17 59390879 59391169 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21777320
chr17 59390879 59391169 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108279392
chr17 59390966 59391246 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21777321
chr17 59390966 59391246 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108279393
chr17 59390969 59391259 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21777322
chr17 59390969 59391259 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108279394
chr17 59391017 59391812 ZNF143 GTRD no Epithelial (MCF-7) 21777323
chr17 59391017 59391812 ZNF143 GTRD no Epithelial (MCF-7) 108279395
chr17 59391033 59391044 NFKB1 JASPAR yes 21268410
chr17 59391033 59391044 NFKB1 JASPAR yes 55146957
chr17 59391038 59391044 ETS1 JASPAR yes 21268411
chr17 59391038 59391044 ETS1 JASPAR yes 55146958
chr17 59391038 59391048 ELK1 JASPAR yes 21268412
chr17 59391038 59391048 ELK1 JASPAR yes 55146959
Genes associated with rs554333563[chr17:59391044], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More