EnhancerDB
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  3. vista25404[chr17:59398606-59399069]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25404[chr17:59398606-59399069]
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Tissue distribution of vista25404
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Transcription factor that possibly regulate vista25404[chr17:59398606-59399069]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 59398616 59398625 NKX3-2 JASPAR yes 21268507
chr17 59398616 59398625 NKX3-2 JASPAR yes 55148026
chr17 59398634 59398652 SRF JASPAR yes 21268508
chr17 59398634 59398652 SRF JASPAR yes 55148027
chr17 59398635 59398638 MYB TRANSFAC yes 21268509
chr17 59398635 59398638 MYB TRANSFAC yes 55148028
chr17 59398677 59398690 DUXA JASPAR yes 21268510
chr17 59398677 59398690 DUXA JASPAR yes 55148029
chr17 59398684 59398688 YY1 TRANSFAC yes 21268511
chr17 59398684 59398688 YY1 TRANSFAC yes 55148030
chr17 59398701 59398711 TEAD1 JASPAR yes 21268512
chr17 59398701 59398711 TEAD4 JASPAR yes 21268513
chr17 59398701 59398711 TEAD1 JASPAR yes 55148031
chr17 59398701 59398711 TEAD4 JASPAR yes 55148032
chr17 59398702 59398710 TEAD3 JASPAR yes 21268514
chr17 59398702 59398710 TEAD3 JASPAR yes 55148033
chr17 59398703 59398724 ZNF263 JASPAR yes 21268515
chr17 59398703 59398724 ZNF263 JASPAR yes 55148034
chr17 59398705 59398710 ETS2 TRANSFAC yes 21268516
chr17 59398705 59398710 ETS2 TRANSFAC yes 55148035
chr17 59398710 59398731 ZNF263 JASPAR yes 21268517
chr17 59398710 59398731 ZNF263 JASPAR yes 55148036
chr17 59398713 59398723 SP1 JASPAR yes 21268518
chr17 59398713 59398723 SP1 JASPAR yes 55148037
chr17 59398714 59398724 SP1 JASPAR yes 21268519
chr17 59398714 59398724 SP1 JASPAR yes 55148038
chr17 59398717 59398738 ZNF263 JASPAR yes 21268520
chr17 59398717 59398738 ZNF263 JASPAR yes 55148039
chr17 59398720 59398741 ZNF263 JASPAR yes 21268521
chr17 59398720 59398741 ZNF263 JASPAR yes 55148040
chr17 59398756 59398761 TFAP2A TRANSFAC yes 21268522
chr17 59398756 59398761 TFAP2A TRANSFAC yes 55148041
chr17 59398756 59398762 MZF1 JASPAR yes 21268523
chr17 59398756 59398762 MZF1 JASPAR yes 55148042
chr17 59398758 59398763 ETS2 TRANSFAC yes 21268524
chr17 59398758 59398763 ETS2 TRANSFAC yes 55148043
chr17 59398764 59398777 NR2F1 JASPAR yes 21268525
chr17 59398764 59398777 NR2F1 JASPAR yes 55148044
chr17 59398768 59398778 RORA JASPAR yes 21268526
chr17 59398768 59398778 RORA JASPAR yes 55148045
chr17 59398770 59398776 PTF TRANSFAC yes 21268527
chr17 59398770 59398776 PTF TRANSFAC yes 55148046
chr17 59398776 59398782 TCF1 TRANSFAC yes 21268528
chr17 59398776 59398782 TCF1 TRANSFAC yes 55148047
chr17 59398807 59398815 FEV JASPAR yes 21268529
chr17 59398807 59398815 FEV JASPAR yes 55148048
chr17 59398837 59398854 RXRA JASPAR yes 21268530
chr17 59398837 59398854 RXRA JASPAR yes 55148049
chr17 59398844 59398857 NR2F1 JASPAR yes 21268531
chr17 59398844 59398857 NR2F1 JASPAR yes 55148050
chr17 59398848 59398856 CREB1 JASPAR yes 21268532
chr17 59398848 59398856 CREB1 JASPAR yes 55148051
chr17 59398865 59398869 YY1 TRANSFAC yes 21268533
chr17 59398865 59398869 YY1 TRANSFAC yes 55148052
chr17 59398876 59398881 SP1 TRANSFAC yes 21268534
chr17 59398876 59398881 SP1 TRANSFAC yes 55148053
chr17 59398884 59398899 RUNX2 JASPAR yes 21268535
chr17 59398884 59398899 RUNX2 JASPAR yes 55148054
chr17 59398888 59398903 RFX5 JASPAR yes 21268536
chr17 59398888 59398903 RFX5 JASPAR yes 55148055
chr17 59398893 59398897 ESR1 TRANSFAC yes 21268537
chr17 59398893 59398897 ESR1 TRANSFAC yes 55148056
chr17 59398916 59398928 TAL1 JASPAR yes 21268538
chr17 59398916 59398928 TAL1 JASPAR yes 55148057
chr17 59398918 59398924 YY1 JASPAR yes 21268539
chr17 59398918 59398924 YY1 JASPAR yes 55148058
chr17 59398961 59398966 GATA2 JASPAR yes 21268540
chr17 59398961 59398966 GATA2 JASPAR yes 55148059
chr17 59398967 59398982 TFAP2A JASPAR yes 21268541
chr17 59398967 59398982 TFAP2C JASPAR yes 21268542
chr17 59398967 59398982 TFAP2A JASPAR yes 55148060
chr17 59398967 59398982 TFAP2C JASPAR yes 55148061
chr17 59398968 59398985 RARA JASPAR yes 21268543
chr17 59398968 59398985 RARA JASPAR yes 55148062
chr17 59398987 59398993 LEF1 TRANSFAC yes 21268544
chr17 59398987 59398993 SOX10 JASPAR yes 21268545
chr17 59398987 59398993 LEF1 TRANSFAC yes 55148063
chr17 59398987 59398993 SOX10 JASPAR yes 55148064
chr17 59398988 59399000 FOXC2 JASPAR yes 21268546
chr17 59398988 59399000 FOXC2 JASPAR yes 55148065
chr17 59398989 59398997 FOXO3 JASPAR yes 21268547
chr17 59398989 59398997 FOXO3 JASPAR yes 55148066
chr17 59399000 59399005 MYC TRANSFAC yes 21268548
chr17 59399000 59399005 MYC TRANSFAC yes 55148067
chr17 59399006 59399015 HIC2 JASPAR yes 21268549
chr17 59399006 59399015 HIC2 JASPAR yes 55148068
chr17 59399008 59399014 NFIC JASPAR yes 21268550
chr17 59399008 59399014 NFIC JASPAR yes 55148069
chr17 59399009 59399024 HNF4G JASPAR yes 21268551
chr17 59399009 59399024 HNF4G JASPAR yes 55148070
chr17 59399012 59399016 YY1 TRANSFAC yes 21268552
chr17 59399012 59399016 YY1 TRANSFAC yes 55148071
chr17 59399057 59399065 EHF JASPAR yes 21268553
chr17 59399057 59399065 EHF JASPAR yes 55148072
SNP sites on vista25404[chr17:59398606-59399069]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 59398646 rs539646909 A G
SRF
4967467
chr17 59398721 rs151208947 C T
SP1 ZNF263
4967468
chr17 59398726 rs141432226 A G
ZNF263
4967469
chr17 59398836 rs147020775 G A no 4967470
chr17 59398877 rs573658796 G A
SP1
4967471
chr17 59399031 rs147558176 A G no 4967472
Genes possibly regulated by vista25404[chr17:59398606-59399069]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 59477257 59486827 + TBX2 ENSG00000121068.9 59477257 0.92 0.93 16119 21812
chr17 59489112 59490641 + C17orf82 ENSG00000187013.2 59489112 0.89 0.99 16120 9957
Expression level of Genes
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miRNAs possibly regulated by vista25404[chr17:59398606-59399069]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results