EnhancerDB
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  3. vista25410[chr17:59488217-59488528]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25410[chr17:59488217-59488528]
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Tissue distribution of vista25410
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Transcription factor that possibly regulate vista25410[chr17:59488217-59488528]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 59487554 59488520 EZH2 UCSC Txn Factor no Conserved 108279469
chr17 59488064 59488498 CTCF UCSC Txn Factor no Conserved 108279473
chr17 59488261 59488271 TBX21 JASPAR yes 21268837
chr17 59488279 59488283 YY1 TRANSFAC yes 21268838
chr17 59488283 59488294 E2F6 JASPAR yes 21268839
chr17 59488304 59488315 NRF1 JASPAR yes 21268840
chr17 59488306 59488317 NRF1 JASPAR yes 21268841
chr17 59488308 59488319 TFAP2A JASPAR yes 21268842
chr17 59488308 59488319 TFAP2B JASPAR yes 21268843
chr17 59488309 59488318 TFAP2A JASPAR yes 21268844
chr17 59488336 59488355 CTCF JASPAR yes 21268845
chr17 59488337 59488352 ZIC4 JASPAR yes 21268846
chr17 59488338 59488352 ZIC1 JASPAR yes 21268847
chr17 59488345 59488358 NFKB2 JASPAR yes 21268848
chr17 59488347 59488351 LFA1 TRANSFAC yes 21268849
chr17 59488365 59488376 E2F1 JASPAR yes 21268850
chr17 59488366 59488377 E2F4 JASPAR yes 21268851
chr17 59488366 59488377 E2F6 JASPAR yes 21268852
chr17 59488370 59488376 MAZ TRANSFAC yes 21268853
chr17 59488376 59488386 GCM2 JASPAR yes 21268854
chr17 59488376 59488387 GCM1 JASPAR yes 21268855
chr17 59488382 59488392 GCM2 JASPAR yes 21268856
chr17 59488387 59488391 LFA1 TRANSFAC yes 21268857
chr17 59488399 59488409 SP1 JASPAR yes 21268858
chr17 59488404 59488409 SP1 TRANSFAC yes 21268859
chr17 59488405 59488410 SP1 TRANSFAC yes 21268860
chr17 59488425 59488430 SP1 TRANSFAC yes 21268861
chr17 59488426 59488431 SP1 TRANSFAC yes 21268862
chr17 59488426 59488432 SP1 TRANSFAC yes 21268863
chr17 59488430 59488435 SP1 TRANSFAC yes 21268864
chr17 59488460 59488479 RFX2 JASPAR yes 21268865
chr17 59488464 59488480 RFX2 JASPAR yes 21268866
chr17 59488464 59488480 RFX3 JASPAR yes 21268867
chr17 59488464 59488480 RFX4 JASPAR yes 21268868
chr17 59488464 59488480 RFX5 JASPAR yes 21268869
chr17 59488465 59488484 RFX2 JASPAR yes 21268870
chr17 59488479 59488499 RREB1 JASPAR yes 21268871
chr17 59488482 59488487 SP1 TRANSFAC yes 21268872
chr17 59488485 59488495 SP1 JASPAR yes 21268873
chr17 59488487 59488492 SP1 TRANSFAC yes 21268874
chr17 59488492 59488497 SP1 TRANSFAC yes 21268875
chr17 59488510 59488521 NFKB1 JASPAR yes 21268876
SNP sites on vista25410[chr17:59488217-59488528]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 59488228 rs544624709 C T
CTCF EZH2
4968345
chr17 59488370 rs5821325 CG C
CTCF E2F1 E2F4 E2F6 EZH2 MAZ
4968346
chr17 59488370 rs796573621 CG C
CTCF E2F1 E2F4 E2F6 EZH2 MAZ
4968347
chr17 59488398 rs8066348 G C
CTCF EZH2
4968348
chr17 59488493 rs730562 G T
CTCF EZH2 RREB1 SP1
4968349
Genes possibly regulated by vista25410[chr17:59488217-59488528]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 59477257 59486827 + TBX2 ENSG00000121068.9 59477257 0.92 0.93 16119 89040
chr17 59489112 59490641 + C17orf82 ENSG00000187013.2 59489112 0.89 0.99 16120 99416
chr17 59529765 59562471 + TBX4 ENSG00000121075.5 59529765 1.0 1.0 16121 58763
Expression level of Genes
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miRNAs possibly regulated by vista25410[chr17:59488217-59488528]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results