EnhancerDB
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  3. rs544624709[chr17:59488228]
Enhancers that have rs544624709[chr17:59488228]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 59488217 59488528 vista25410
VISTA
Transcript factors that have rs544624709[chr17:59488228]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 59487554 59488520 EZH2 UCSC Txn Factor no Conserved 108279469
chr17 59487810 59488520 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108279470
chr17 59487897 59488398 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108279471
chr17 59487956 59489230 ZNF143 GTRD no Epithelial (MCF-7) 108279472
chr17 59488064 59488498 CTCF UCSC Txn Factor no Conserved 108279473
chr17 59488131 59488491 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108279474
chr17 59488194 59488484 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108279475
chr17 59488201 59488471 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108279476
chr17 59488204 59488448 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108279477
chr17 59488225 59488441 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108279478
Genes associated with rs544624709[chr17:59488228], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More