EnhancerDB
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  3. vista25538[chr17:62958497-62958860]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25538[chr17:62958497-62958860]
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Tissue distribution of vista25538
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Transcription factor that possibly regulate vista25538[chr17:62958497-62958860]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 62958482 62958502 TP63 JASPAR yes 21274840
chr17 62958482 62958502 TP63 JASPAR yes 55331744
chr17 62958483 62958501 TP73 JASPAR yes 21274841
chr17 62958483 62958501 TP73 JASPAR yes 55331745
chr17 62958498 62958503 GATA2 JASPAR yes 21274842
chr17 62958498 62958503 GATA2 JASPAR yes 55331747
chr17 62958501 62958505 TEAD2 TRANSFAC yes 21274843
chr17 62958501 62958505 TEAD2 TRANSFAC yes 55331748
chr17 62958501 62958506 TBP TRANSFAC yes 21274844
chr17 62958501 62958506 TBP TRANSFAC yes 55331749
chr17 62958517 62958534 RARA JASPAR yes 21274845
chr17 62958517 62958534 RARA JASPAR yes 55331750
chr17 62958537 62958552 HNF4A JASPAR yes 21274846
chr17 62958537 62958552 HNF4A JASPAR yes 55331751
chr17 62958538 62958553 HNF4G JASPAR yes 21274847
chr17 62958538 62958553 HNF4G JASPAR yes 55331752
chr17 62958553 62958574 ZNF263 JASPAR yes 21274848
chr17 62958553 62958574 ZNF263 JASPAR yes 55331753
chr17 62958556 62958577 ZNF263 JASPAR yes 21274849
chr17 62958556 62958577 ZNF263 JASPAR yes 55331754
chr17 62958573 62958588 NFYB JASPAR yes 21274850
chr17 62958573 62958588 NFYB JASPAR yes 55331755
chr17 62958575 62958591 NFYA JASPAR yes 21274851
chr17 62958575 62958591 NFYA JASPAR yes 55331756
chr17 62958576 62958594 NFYA JASPAR yes 21274852
chr17 62958576 62958594 NFYA JASPAR yes 55331757
chr17 62958580 62958584 H1TF2 TRANSFAC yes 21274853
chr17 62958580 62958584 NFE TRANSFAC yes 21274854
chr17 62958580 62958584 SRF TRANSFAC yes 21274855
chr17 62958580 62958584 H1TF2 TRANSFAC yes 55331758
chr17 62958580 62958584 NFE TRANSFAC yes 55331759
chr17 62958580 62958584 SRF TRANSFAC yes 55331760
chr17 62958595 62958610 MEF2A JASPAR yes 21274856
chr17 62958595 62958610 MEF2A JASPAR yes 55331761
chr17 62958596 62958608 MEF2A JASPAR yes 21274857
chr17 62958596 62958608 MEF2B JASPAR yes 21274858
chr17 62958596 62958608 MEF2D JASPAR yes 21274859
chr17 62958596 62958608 MEF2A JASPAR yes 55331762
chr17 62958596 62958608 MEF2B JASPAR yes 55331763
chr17 62958596 62958608 MEF2D JASPAR yes 55331764
chr17 62958597 62958607 MEF2A JASPAR yes 21274860
chr17 62958597 62958607 MEF2A JASPAR yes 55331765
chr17 62958604 62958609 GATA2 JASPAR yes 21274861
chr17 62958604 62958609 GATA2 JASPAR yes 55331766
chr17 62958625 62958631 NFIC JASPAR yes 21274862
chr17 62958625 62958631 NFIC JASPAR yes 55331767
chr17 62958639 62958653 RXRG JASPAR yes 21274863
chr17 62958639 62958653 RXRG JASPAR yes 55331768
chr17 62958655 62958659 H1TF2 TRANSFAC yes 21274864
chr17 62958655 62958659 NFE TRANSFAC yes 21274865
chr17 62958655 62958659 SRF TRANSFAC yes 21274866
chr17 62958655 62958659 H1TF2 TRANSFAC yes 55331769
chr17 62958655 62958659 NFE TRANSFAC yes 55331770
chr17 62958655 62958659 SRF TRANSFAC yes 55331771
chr17 62958671 62958679 RHOXF1 JASPAR yes 21274867
chr17 62958671 62958679 RHOXF1 JASPAR yes 55331772
chr17 62958714 62958727 ATF4 JASPAR yes 21274868
chr17 62958714 62958727 ATF4 JASPAR yes 55331773
chr17 62958715 62958729 TLX1 JASPAR yes 21274869
chr17 62958715 62958729 TLX1 JASPAR yes 55331774
chr17 62958725 62958742 ZNF410 JASPAR yes 21274870
chr17 62958725 62958742 ZNF410 JASPAR yes 55331775
chr17 62958739 62958749 NFATC3 JASPAR yes 21274871
chr17 62958739 62958749 NFATC3 JASPAR yes 55331776
chr17 62958740 62958747 NFATC2 JASPAR yes 21274872
chr17 62958740 62958747 NFATC2 JASPAR yes 55331777
chr17 62958750 62958766 RFX4 JASPAR yes 21274873
chr17 62958750 62958766 RFX4 JASPAR yes 55331778
chr17 62958794 62958803 NFIX JASPAR yes 21274874
chr17 62958794 62958803 NFIX JASPAR yes 55331779
chr17 62958795 62958801 NFIC JASPAR yes 21274875
chr17 62958795 62958801 NFIC JASPAR yes 55331780
chr17 62958795 62958809 TLX1 JASPAR yes 21274876
chr17 62958795 62958809 TLX1 JASPAR yes 55331781
chr17 62958796 62958810 TLX1 JASPAR yes 21274877
chr17 62958796 62958810 TLX1 JASPAR yes 55331782
chr17 62958802 62958819 RARA JASPAR yes 21274878
chr17 62958802 62958819 RXRA JASPAR yes 21274879
chr17 62958802 62958819 RARA JASPAR yes 55331783
chr17 62958802 62958819 RXRA JASPAR yes 55331784
chr17 62958828 62958832 YY1 TRANSFAC yes 21274880
chr17 62958828 62958832 YY1 TRANSFAC yes 55331785
chr17 62958828 62958849 ZNF263 JASPAR yes 21274881
chr17 62958828 62958849 ZNF263 JASPAR yes 55331786
SNP sites on vista25538[chr17:62958497-62958860]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 62958586 rs537391106 C T
NFYA NFYB
4986603
chr17 62958798 rs187161727 G C
NFIC NFIX TLX1
4986604
chr17 62958812 rs114579658 C T
RARA RXRA
4986605
Genes possibly regulated by vista25538[chr17:62958497-62958860]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 62850430 62915598 - LRRC37A3 ENSG00000176809.6 62915598 0.88 0.98 16164 57101
chr17 63006833 63052957 - GNA13 ENSG00000120063.5 63052957 0.72 0.99 16165 5903
Expression level of Genes
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miRNAs possibly regulated by vista25538[chr17:62958497-62958860]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results